RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 TRIM29Q14134 588 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 STK38Q15208 465 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 LINC00301Q8NCQ3 95 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 NOL7Q9UMY1 257 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 XDHP47989 1333 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 MYH6P13533 1939 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 MYH2Q9UKX2 1941 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 KIF28PB7ZC32 967 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 FGRP09769 529 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 KRT40Q6A162 431 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 ADALQ6DHV7 355 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 SASS6Q6UVJ0 657 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 MRPS27Q92552 414 aaKnown RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 PHKBQ93100 1093 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 KINO60870 393 aaKnown RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■□□□□ 11.3
GABPB1-202ENST00000359031 ST5P78524 1137 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 PPP2R5BQ15173 497 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 C15orf52Q6ZUT6 534 aaKnown RBP17.29■□□□□ 0.36
GABPB1-202ENST00000359031 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 TRIM22Q8IYM9 498 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
GABPB1-202ENST00000359031 NAV1Q8NEY1 1877 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
GABPB1-202ENST00000359031 SEC23AQ15436 765 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
GABPB1-202ENST00000359031 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
GABPB1-202ENST00000359031 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 CLIC4Q9Y696 253 aa17.28■□□□□ 0.36
GABPB1-202ENST00000359031 TNKSO95271 1327 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 SPTLC2O15270 562 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 GYS1P13807 737 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 NT5C2P49902 561 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 SNW1Q13573 536 aaKnown RBP17.27■□□□□ 0.36
GABPB1-202ENST00000359031 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
GABPB1-202ENST00000359031 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
GABPB1-202ENST00000359031 ADCY5O95622 1261 aa17.26■□□□□ 0.35
GABPB1-202ENST00000359031 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
GABPB1-202ENST00000359031 U2AF2P26368 475 aaKnown RBP eCLIP17.26■□□□□ 0.35
GABPB1-202ENST00000359031 PRDX5P30044 214 aa17.26■□□□□ 0.35
GABPB1-202ENST00000359031 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
GABPB1-202ENST00000359031 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
GABPB1-202ENST00000359031 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
GABPB1-202ENST00000359031 ZNF804AQ7Z570 1209 aa17.26■□□□□ 0.35
GABPB1-202ENST00000359031 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
GABPB1-202ENST00000359031 ORC4O43929 436 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 DEXIO95424 95 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 SLC3A2P08195 630 aaKnown RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 SBK1Q52WX2 424 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■■□□ 15.6
GABPB1-202ENST00000359031 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 GSTO1P78417 241 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 STX1AQ16623 288 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 FANCBQ8NB91 859 aa17.25■□□□□ 0.35
GABPB1-202ENST00000359031 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
GABPB1-202ENST00000359031 PPP6R2O75170 966 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 SERPINB2P05120 415 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CALM1P0DP23 149 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CALM2P0DP24 149 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CALM3P0DP25 149 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 ENAHQ8N8S7 591 aaPredicted RBP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms