RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PPP1R21Q6ZMI0 780 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 SLC8A3P57103 927 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 MAP7D1Q3KQU3 841 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCN8A-202ENST00000355133 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
SCN8A-202ENST00000355133 CAPN2P17655 700 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 SNX16P57768 344 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 INF2Q27J81 1249 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 GPATCH11Q8N954 259 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 ZBED4O75132 1171 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 GCKRQ14397 625 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 ASIC2Q16515 512 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 MRRFQ96E11 262 aaKnown RBP14.77□□□□□ -0.04
SCN8A-202ENST00000355133 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 KCNJ14Q9UNX9 436 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCN8A-202ENST00000355133 PPP1R2P41236 205 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 NONOQ15233 471 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCN8A-202ENST00000355133 BRDTQ58F21 947 aaPredicted RBP14.77□□□□□ -0.04
SCN8A-202ENST00000355133 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 CPLX4Q7Z7G2 160 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 ODF2LQ9ULJ1 636 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 EXOC7Q9UPT5 735 aa14.77□□□□□ -0.04
SCN8A-202ENST00000355133 CFBP00751 764 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 FMNL3Q8IVF7 1028 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 TRIM6Q9C030 488 aaPredicted RBP14.77□□□□□ -0.05
SCN8A-202ENST00000355133 SYNRGQ9UMZ2 1314 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 E7EVH7 732 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 CCDC121Q6ZUS5 278 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
SCN8A-202ENST00000355133 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 CETN3O15182 167 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 LLPHQ9BRT6 129 aaKnown RBP14.76□□□□□ -0.05
SCN8A-202ENST00000355133 VWA3BQ502W6 1294 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 FAM204AQ9H8W3 233 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 CHL1O00533 1208 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 GAS8O95995 478 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 HOXB7P09629 217 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 PAK1Q13153 545 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 HERC4Q5GLZ8 1057 aaPredicted RBP14.76□□□□□ -0.05
SCN8A-202ENST00000355133 MYCT1Q8N699 235 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 MROH5Q6ZUA9 1318 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 SPATA24Q86W54 205 aa14.76□□□□□ -0.05
SCN8A-202ENST00000355133 SGSM2O43147 1006 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 CUTAO60888 179 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 IVLP07476 585 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 ERCC5P28715 1186 aaPredicted RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 CCDC26Q8TAB7 109 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 EDC4Q6P2E9 1401 aaKnown RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 DAPK3O43293 454 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 CLCN1P35523 988 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 LIN9Q5TKA1 542 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 KRT25Q7Z3Z0 450 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 JAKMIP2Q96AA8 810 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 GLT8D2Q9H1C3 349 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 AZI2Q9H6S1 392 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 TFAP4Q01664 338 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 CALCRLQ16602 461 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 TRIM35Q9UPQ4 493 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 DNM3Q9UQ16 869 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 APBA3O96018 575 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 UTP14CQ5TAP6 766 aaKnown RBP14.75□□□□□ -0.05
SCN8A-202ENST00000355133 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
SCN8A-202ENST00000355133 SH3BP5O60239 455 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 LONRF3Q496Y0 759 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 KRT40Q6A162 431 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 CYP26C1Q6V0L0 522 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 TRIM7Q9C029 511 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 ARID4AP29374 1257 aaPredicted RBP14.74□□□□□ -0.05
SCN8A-202ENST00000355133 NIM1KQ8IY84 436 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 USP21Q9UK80 565 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 FAM170AA1A519 330 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 FANCCQ00597 558 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 CLSTN2Q9H4D0 955 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 DKC1O60832 514 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCN8A-202ENST00000355133 GCNT3O95395 438 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 PPP2R3AQ06190 1150 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 UHRF1BP1Q6BDS2 1440 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
SCN8A-202ENST00000355133 KRT19P08727 400 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 DLGAP5Q15398 846 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 STAMQ92783 540 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 VPS54Q9P1Q0 977 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCN8A-202ENST00000355133 AOX1Q06278 1338 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 TRIM14Q14142 442 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 ZNF202O95125 648 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 GTF2IP78347 998 aa14.73□□□□□ -0.05
SCN8A-202ENST00000355133 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms