RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 AIFM3Q96NN9 605 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 BAZ2AQ9UIF9 1905 aaKnown RBP19.38■□□□□ 0.69
SAMM50-201ENST00000350028 PLSCR1O15162 318 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 SPTLC2O15270 562 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 CAVIN2O95810 425 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 SBK1Q52WX2 424 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 FSIP1Q8NA03 581 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 MRPS27Q92552 414 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 GOLPH3LQ9H4A5 285 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 USP25Q9UHP3 1055 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 NOL7Q9UMY1 257 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 TNKSO95271 1327 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 USP17L21D6R901 530 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 KINO60870 393 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 SLC3A2P08195 630 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 ATP2B4P23634 1241 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 MSNP26038 577 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 GNL2Q13823 731 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 TXNRD1Q16881 649 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 DZIP1Q86YF9 867 aaKnown RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 FANCBQ8NB91 859 aa19.37■□□□□ 0.69
SAMM50-201ENST00000350028 ZSCAN10Q96SZ4 725 aaPredicted RBP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 AATFQ9NY61 560 aaKnown RBP eCLIP19.37■□□□□ 0.69
SAMM50-201ENST00000350028 ORC4O43929 436 aa19.36■□□□□ 0.69
SAMM50-201ENST00000350028 ADCY5O95622 1261 aa19.36■□□□□ 0.69
SAMM50-201ENST00000350028 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.693e-6■■■□□ 15.4
SAMM50-201ENST00000350028 GSTO1P78417 241 aa19.36■□□□□ 0.69
SAMM50-201ENST00000350028 IQCA1Q86XH1 822 aa19.36■□□□□ 0.69
SAMM50-201ENST00000350028 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
SAMM50-201ENST00000350028 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
SAMM50-201ENST00000350028 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
SAMM50-201ENST00000350028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.36■□□□□ 0.69
SAMM50-201ENST00000350028 CYP2D7A0A087X1C5 515 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 BBOX1O75936 387 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 DEXIO95424 95 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 LDHBP07195 334 aaKnown RBP19.35■□□□□ 0.69
SAMM50-201ENST00000350028 NT5C2P49902 561 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 NBPF11Q86T75 865 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 RGPD3A6NKT7 1758 aaPredicted RBP19.35■□□□□ 0.69
SAMM50-201ENST00000350028 LAMB1P07942 1786 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 RGPD4Q7Z3J3 1758 aa19.35■□□□□ 0.69
SAMM50-201ENST00000350028 PTMAP06454 111 aaKnown RBP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 SLC39A14Q15043 492 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 ANO6Q4KMQ2 910 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 DLEC1Q9Y238 1755 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 LDHCP07864 332 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 CALM1P0DP23 149 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 CALM2P0DP24 149 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 CALM3P0DP25 149 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 GPSM2P81274 684 aa19.34■□□□□ 0.69
SAMM50-201ENST00000350028 SAFBQ15424 915 aaKnown RBP eCLIP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 FMR1NBQ8N0W7 255 aaPredicted RBP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 ENAHQ8N8S7 591 aaPredicted RBP19.34■□□□□ 0.69
SAMM50-201ENST00000350028 SMIM22K7EJ46 135 aa19.33■□□□□ 0.68
SAMM50-201ENST00000350028 IFIT1BQ5T764 474 aaKnown RBP19.33■□□□□ 0.68
SAMM50-201ENST00000350028 CATIPQ7Z7H3 387 aa19.33■□□□□ 0.68
SAMM50-201ENST00000350028 JMYQ8N9B5 988 aa19.33■□□□□ 0.68
SAMM50-201ENST00000350028 CRAMP1Q96RY5 1269 aa19.33■□□□□ 0.68
SAMM50-201ENST00000350028 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.68
SAMM50-201ENST00000350028 ZKSCAN5Q9Y2L8 839 aa19.33■□□□□ 0.68
SAMM50-201ENST00000350028 PPP6R2O75170 966 aa19.32■□□□□ 0.68
SAMM50-201ENST00000350028 MMP1P03956 469 aa19.32■□□□□ 0.68
SAMM50-201ENST00000350028 PDE4BQ07343 736 aa19.32■□□□□ 0.68
SAMM50-201ENST00000350028 CBX8Q9HC52 389 aa19.32■□□□□ 0.68
SAMM50-201ENST00000350028 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
SAMM50-201ENST00000350028 GGA1Q9UJY5 639 aa19.32■□□□□ 0.68
SAMM50-201ENST00000350028 DDAH1O94760 285 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 BAG3O95817 575 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 CMA1P23946 247 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 PPP4CP60510 307 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 CAMKK2Q96RR4 588 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 KLRG2A4D1S0 409 aaPredicted RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 UFL1O94874 794 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 EN1Q05925 392 aaPredicted RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 DDR1Q08345 913 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 AXDND1Q5T1B0 1012 aaPredicted RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 FOXP1Q9H334 677 aaPredicted RBP19.31■□□□□ 0.68
SAMM50-201ENST00000350028 CD209Q9NNX6 404 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 JAG2Q9Y219 1238 aa19.31■□□□□ 0.68
SAMM50-201ENST00000350028 A0A1B0GVL5 298 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 PRDM1O75626 825 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 IL1R1P14778 569 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 PTPAQ15257 358 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 EZH2Q15910 746 aaKnown RBP19.3■□□□□ 0.68
SAMM50-201ENST00000350028 STX1AQ16623 288 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 NOSTRINQ8IVI9 506 aa19.3■□□□□ 0.68
SAMM50-201ENST00000350028 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms