RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SART3Q15020 963 aaKnown RBP23.57■■□□□ 1.36
SPNS1-203ENST00000334536 BRD3Q15059 726 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 ALX1Q15699 326 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 NBPF20Q3BBV1 942 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 SYNE3Q6ZMZ3 975 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 SDF4Q9BRK5 362 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 RAI14Q9P0K7 980 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 ANGEL1Q9UNK9 670 aaKnown RBP23.57■■□□□ 1.36
SPNS1-203ENST00000334536 TBC1D2BQ9UPU7 963 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 CLIC4Q9Y696 253 aa23.57■■□□□ 1.36
SPNS1-203ENST00000334536 CCDC151A5D8V7 595 aa23.56■■□□□ 1.36
SPNS1-203ENST00000334536 SMC2O95347 1197 aa23.56■■□□□ 1.36
SPNS1-203ENST00000334536 TDO2P48775 406 aa23.56■■□□□ 1.36
SPNS1-203ENST00000334536 SYNE4Q8N205 404 aa23.56■■□□□ 1.36
SPNS1-203ENST00000334536 RABGGTAQ92696 567 aa23.56■■□□□ 1.36
SPNS1-203ENST00000334536 AHDC1Q5TGY3 1603 aaPredicted RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 PPFIA3O75145 1194 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 CALRP27797 417 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 EIF5P55010 431 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 KIF23Q02241 960 aaPredicted RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 TADA2BQ86TJ2 420 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 TMEM87BQ96K49 555 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 BPIFA3Q9BQP9 254 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 NBPF3Q9H094 633 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 PIH1D3Q9NQM4 214 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 TRMT112Q9UI30 125 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 BCL9O00512 1426 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 ITGB4P16144 1822 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 SH2B2O14492 632 aaPredicted RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 CPLX2Q6PUV4 134 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 HNRNPLLQ8WVV9 542 aaKnown RBP23.55■■□□□ 1.36
SPNS1-203ENST00000334536 MYH3P11055 1940 aa23.55■■□□□ 1.36
SPNS1-203ENST00000334536 C4AP0C0L4 1744 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 C4BP0C0L5 1744 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 DISP2A7MBM2 1401 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 EIF3JO75822 258 aaKnown RBP23.54■■□□□ 1.36
SPNS1-203ENST00000334536 NDUFA8P51970 172 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 ANO1Q5XXA6 986 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
SPNS1-203ENST00000334536 RBM28Q9NW13 759 aaKnown RBP23.54■■□□□ 1.36
SPNS1-203ENST00000334536 KIAA1468Q9P260 1216 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 MROH5Q6ZUA9 1318 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
SPNS1-203ENST00000334536 CCDC102BQ68D86 513 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 LPIN2Q92539 896 aa23.54■■□□□ 1.36
SPNS1-203ENST00000334536 A0A1B0GVL5 298 aa23.53■■□□□ 1.36
SPNS1-203ENST00000334536 PDE6AP16499 860 aa23.53■■□□□ 1.36
SPNS1-203ENST00000334536 CMA1P23946 247 aa23.53■■□□□ 1.36
SPNS1-203ENST00000334536 PUM3Q15397 648 aaKnown RBP23.53■■□□□ 1.36
SPNS1-203ENST00000334536 SAMD1Q6SPF0 538 aaPredicted RBP23.53■■□□□ 1.36
SPNS1-203ENST00000334536 FCHSD1Q86WN1 690 aa23.53■■□□□ 1.36
SPNS1-203ENST00000334536 ZNF532Q9HCE3 1301 aa23.53■■□□□ 1.36
SPNS1-203ENST00000334536 METAP2P50579 478 aaKnown RBP eCLIP23.52■■□□□ 1.36
SPNS1-203ENST00000334536 TBC1D10CQ8IV04 446 aa23.52■■□□□ 1.36
SPNS1-203ENST00000334536 MPHOSPH8Q99549 860 aa23.52■■□□□ 1.36
SPNS1-203ENST00000334536 LRP5O75197 1615 aa23.52■■□□□ 1.36
SPNS1-203ENST00000334536 TCRBV5S4A2TA0A5A2 114 aa23.52■■□□□ 1.36
SPNS1-203ENST00000334536 IDH1O75874 414 aaKnown RBP23.52■■□□□ 1.36
SPNS1-203ENST00000334536 FGFR2P21802 821 aa23.52■■□□□ 1.36
SPNS1-203ENST00000334536 IL6STP40189 918 aaPredicted RBP23.52■■□□□ 1.36
SPNS1-203ENST00000334536 RSRC2Q7L4I2 434 aaKnown RBP23.52■■□□□ 1.36
SPNS1-203ENST00000334536 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.51■■□□□ 1.35
SPNS1-203ENST00000334536 SLC39A14Q15043 492 aa23.51■■□□□ 1.35
SPNS1-203ENST00000334536 CYB5R4Q7L1T6 521 aa23.51■■□□□ 1.35
SPNS1-203ENST00000334536 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
SPNS1-203ENST00000334536 STAG1Q8WVM7 1258 aa23.51■■□□□ 1.35
SPNS1-203ENST00000334536 CCDC34Q96HJ3 373 aa23.51■■□□□ 1.35
SPNS1-203ENST00000334536 STRBPQ96SI9 672 aaKnown RBP23.51■■□□□ 1.35
SPNS1-203ENST00000334536 A1CFQ9NQ94 594 aaKnown RBP23.51■■□□□ 1.35
SPNS1-203ENST00000334536 KIF28PB7ZC32 967 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 H3BQF6 201 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 SFPQP23246 707 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPNS1-203ENST00000334536 PHKA1P46020 1223 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 TUBB4BP68371 445 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 HOMER1Q86YM7 354 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 AOPEPQ8N6M6 819 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 SLC4A9Q96Q91 983 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 ALG1Q9BT22 464 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 ZBTB1Q9Y2K1 713 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 POTEB2H3BUK9 544 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 KIF3CO14782 793 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 SGMS1Q86VZ5 419 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 CARD6Q9BX69 1037 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 PARP3Q9Y6F1 533 aa23.5■■□□□ 1.35
SPNS1-203ENST00000334536 ARAP2Q8WZ64 1704 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 PPFIA4O75335 1185 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 ZNF202O95125 648 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 SLC3A2P08195 630 aaKnown RBP23.49■■□□□ 1.35
SPNS1-203ENST00000334536 LONRF2Q1L5Z9 754 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 APOA5Q6Q788 366 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 JMYQ8N9B5 988 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 BTG4Q9NY30 223 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 PATL2C9JE40 543 aaKnown RBP23.49■■□□□ 1.35
SPNS1-203ENST00000334536 PPP1R12AO14974 1030 aaPredicted RBP23.49■■□□□ 1.35
SPNS1-203ENST00000334536 PPP6R2O75170 966 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 SLC5A1P13866 664 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 NLRP12P59046 1061 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 NBPF11Q86T75 865 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 DZIP3Q86Y13 1208 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms