RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 NR5A1Q13285 461 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 A0A1W2PQ27 194 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 A0A1W2PQ64 194 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 A0A1W2PQD8 194 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 C6orf229H3BNL8 230 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 CDC27P30260 824 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 DYNLL1P63167 89 aaKnown RBP12.21□□□□□ -0.46
MUC4-201ENST00000308466 ZSWIM4Q9H7M6 989 aa12.21□□□□□ -0.46
MUC4-201ENST00000308466 TNKSO95271 1327 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 HIBADHP31937 336 aaKnown RBP12.2□□□□□ -0.46
MUC4-201ENST00000308466 GNG11P61952 73 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 PLIN2Q99541 437 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 SERTAD1Q9UHV2 236 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 CLGNO14967 610 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 CSF1RP07333 972 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 KRT2P35908 639 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 KANK3Q6NY19 840 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
MUC4-201ENST00000308466 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 MST1RQ04912 1400 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 KIF5BP33176 963 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 MRFAP1L1Q96HT8 127 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 OGFRQ9NZT2 677 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 NEDD4P46934 1319 aa12.2□□□□□ -0.46
MUC4-201ENST00000308466 LMTK3Q96Q04 1460 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 ERVV-1B6SEH8 477 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 UBA7P41226 1012 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 ANTXR2P58335 489 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
MUC4-201ENST00000308466 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
MUC4-201ENST00000308466 CDK5RAP3Q96JB5 506 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 COL15A1P39059 1388 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 FUCA2Q9BTY2 467 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 FANCLQ9NW38 375 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
MUC4-201ENST00000308466 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
MUC4-201ENST00000308466 ARHGAP29Q52LW3 1261 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 RRAGBQ5VZM2 374 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
MUC4-201ENST00000308466 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
MUC4-201ENST00000308466 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
MUC4-201ENST00000308466 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
MUC4-201ENST00000308466 NFAT5O94916 1531 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 N4BP3O15049 544 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
MUC4-201ENST00000308466 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 BAG3O95817 575 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 STIM1Q13586 685 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 DEF6Q9H4E7 631 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
MUC4-201ENST00000308466 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
MUC4-201ENST00000308466 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 POSTNQ15063 836 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 AK7Q96M32 723 aa12.18□□□□□ -0.46
MUC4-201ENST00000308466 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
MUC4-201ENST00000308466 KCNQ2O43526 872 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 CDCA7Q9BWT1 371 aaPredicted RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 UBE2Q2LH0YL09 131 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 TCHHQ07283 1943 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 SLU7O95391 586 aaKnown RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 CASQ1P31415 396 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
MUC4-201ENST00000308466 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
MUC4-201ENST00000308466 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
MUC4-201ENST00000308466 GPS2Q13227 327 aa12.16□□□□□ -0.46
MUC4-201ENST00000308466 FMN2Q9NZ56 1722 aa12.16□□□□□ -0.46
MUC4-201ENST00000308466 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
MUC4-201ENST00000308466 MPHOSPH10O00566 681 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms