RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PRDM1O75626 825 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 TNFAIP1Q13829 316 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
CCDC140-201ENST00000295226 MIGA2Q7L4E1 593 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 KRT26Q7Z3Y9 468 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 TTC6Q86TZ1 520 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 AMOTL1Q8IY63 956 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 KCNB2Q92953 911 aa17.99■□□□□ 0.47
CCDC140-201ENST00000295226 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
CCDC140-201ENST00000295226 E7EWF7 191 aa17.98■□□□□ 0.47
CCDC140-201ENST00000295226 RNF20Q5VTR2 975 aa17.98■□□□□ 0.47
CCDC140-201ENST00000295226 SULF1Q8IWU6 871 aa17.98■□□□□ 0.47
CCDC140-201ENST00000295226 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
CCDC140-201ENST00000295226 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
CCDC140-201ENST00000295226 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
CCDC140-201ENST00000295226 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 CPA1P15085 419 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 RBM25P49756 843 aaKnown RBP17.97■□□□□ 0.47
CCDC140-201ENST00000295226 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC140-201ENST00000295226 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
CCDC140-201ENST00000295226 DHX36Q9H2U1 1008 aaKnown RBP17.97■□□□□ 0.47
CCDC140-201ENST00000295226 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 NEDD4P46934 1319 aa17.97■□□□□ 0.47
CCDC140-201ENST00000295226 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
CCDC140-201ENST00000295226 YY1P25490 414 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 AKNAD1Q5T1N1 836 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 KIF2CQ99661 725 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 DNAJC18Q9H819 358 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 SIPA1L1O43166 1804 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 ATRNL1Q5VV63 1379 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 LAMB1P07942 1786 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 LAMA4Q16363 1823 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 CDK8P49336 464 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 GABPAQ06546 454 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
CCDC140-201ENST00000295226 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
CCDC140-201ENST00000295226 SERPINB13Q9UIV8 391 aa17.96■□□□□ 0.47
CCDC140-201ENST00000295226 B4E1Z4 1266 aa17.95■□□□□ 0.46
CCDC140-201ENST00000295226 TRAF5O00463 557 aa17.95■□□□□ 0.46
CCDC140-201ENST00000295226 LDHDQ86WU2 507 aa17.95■□□□□ 0.46
CCDC140-201ENST00000295226 STAG1Q8WVM7 1258 aa17.95■□□□□ 0.46
CCDC140-201ENST00000295226 PRKG1Q13976 671 aa17.94■□□□□ 0.46
CCDC140-201ENST00000295226 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
CCDC140-201ENST00000295226 TSGA10IPQ3SY00 556 aa17.94■□□□□ 0.46
CCDC140-201ENST00000295226 C16orf86Q6ZW13 317 aa17.94■□□□□ 0.46
CCDC140-201ENST00000295226 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
CCDC140-201ENST00000295226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC140-201ENST00000295226 MKNK2Q9HBH9 465 aa17.94■□□□□ 0.46
CCDC140-201ENST00000295226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC140-201ENST00000295226 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 SHMT1P34896 483 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 RRP1BQ14684 758 aaKnown RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 FAM47AQ5JRC9 791 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 FOXP4Q8IVH2 680 aaPredicted RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 COL2A1P02458 1487 aaPredicted RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 ROBO3Q96MS0 1386 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 KIF3CO14782 793 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
CCDC140-201ENST00000295226 PDE4BQ07343 736 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 CDCA5Q96FF9 252 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 EHD4Q9H223 541 aa17.93■□□□□ 0.46
CCDC140-201ENST00000295226 KDM4AO75164 1064 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 FGRP09769 529 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 RASA1P20936 1047 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 ANAPC15P60006 121 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 CYB5R4Q7L1T6 521 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 METTL16Q86W50 562 aaKnown RBP17.92■□□□□ 0.46
CCDC140-201ENST00000295226 RNF41Q9H4P4 317 aaPredicted RBP17.92■□□□□ 0.46
CCDC140-201ENST00000295226 PPP2R3BQ9Y5P8 575 aa17.92■□□□□ 0.46
CCDC140-201ENST00000295226 ZNF784Q8NCA9 323 aaPredicted RBP17.91■□□□□ 0.46
CCDC140-201ENST00000295226 NCOA7Q8NI08 942 aa17.91■□□□□ 0.46
CCDC140-201ENST00000295226 ZKSCAN3Q9BRR0 538 aa17.91■□□□□ 0.46
CCDC140-201ENST00000295226 LRRC2Q9BYS8 371 aa17.91■□□□□ 0.46
CCDC140-201ENST00000295226 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
CCDC140-201ENST00000295226 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
CCDC140-201ENST00000295226 ORC4O43929 436 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 GDF11O95390 407 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 JAG1P78504 1218 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 TRDNQ13061 729 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 KRT32Q14532 448 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 RALYLQ86SE5 291 aaKnown RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 ZNF408Q9H9D4 720 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 DAXXQ9UER7 740 aaPredicted RBP17.9■□□□□ 0.46
CCDC140-201ENST00000295226 NMT2O60551 498 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 AKR1B1P15121 316 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 ANTXR2P58335 489 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 TFAP4Q01664 338 aa17.9■□□□□ 0.46
CCDC140-201ENST00000295226 SUPT20HL1Q3ZLR7 823 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms