RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
SYVN1-201ENST00000294256 LIFRP42702 1097 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 AKAP17AQ02040 695 aaKnown RBP20.22■□□□□ 0.83
SYVN1-201ENST00000294256 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 DPF2Q92785 391 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 TPM4P67936 248 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 CFAP100Q494V2 611 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 PCDHA5Q9Y5H7 936 aa20.22■□□□□ 0.83
SYVN1-201ENST00000294256 TAF1P21675 1872 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 ALX1Q15699 326 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 FAM47AQ5JRC9 791 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 FOXP4Q8IVH2 680 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CDC25BP30305 580 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CBX1P83916 185 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CCZ1BP86790 482 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CCZ1P86791 482 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 PTPN14Q15678 1187 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CAVIN4Q5BKX8 364 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 METTL16Q86W50 562 aaKnown RBP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
SYVN1-201ENST00000294256 ATRNO75882 1429 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 MMP1P03956 469 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 IFNAR1P17181 557 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 FANCCQ00597 558 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 CCDC112Q8NEF3 446 aa20.21■□□□□ 0.83
SYVN1-201ENST00000294256 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 CASP1P29466 404 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 STAG1Q8WVM7 1258 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 V9GY48 417 aaPredicted RBP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 U2AF2P26368 475 aaKnown RBP eCLIP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 NOM1Q5C9Z4 860 aaKnown RBP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 TBC1D9BQ66K14 1250 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 KRI1Q8N9T8 703 aaKnown RBP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 GNL3LQ9NVN8 582 aaKnown RBP20.2■□□□□ 0.82
SYVN1-201ENST00000294256 SERTAD1Q9UHV2 236 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
SYVN1-201ENST00000294256 USP17L12C9JPN9 530 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 USP17L21D6R901 530 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 NCAPHQ15003 741 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 FANCLQ9NW38 375 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 COL4A1P02462 1669 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 GNAT2P19087 354 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 PDE4BQ07343 736 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 ESR2Q92731 530 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 STAMQ92783 540 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 MINPP1Q9UNW1 487 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 SFPQP23246 707 aaKnown RBP eCLIP20.19■□□□□ 0.82
SYVN1-201ENST00000294256 AFMP43652 599 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 UBASH3AP57075 661 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 RESP18Q5W5W9 173 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 ARMCX5Q6P1M9 558 aa20.19■□□□□ 0.82
SYVN1-201ENST00000294256 DOT1LQ8TEK3 1739 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 CYP2D6P10635 497 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 IFIT1BQ5T764 474 aaKnown RBP20.18■□□□□ 0.82
SYVN1-201ENST00000294256 KRBA2Q6ZNG9 492 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 FAM177A1Q8N128 213 aaPredicted RBP20.18■□□□□ 0.82
SYVN1-201ENST00000294256 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 COBLO75128 1261 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 PPP6R2O75170 966 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
SYVN1-201ENST00000294256 PDCL2Q8N4E4 241 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
SYVN1-201ENST00000294256 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
SYVN1-201ENST00000294256 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
SYVN1-201ENST00000294256 KLHL10Q6JEL2 608 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 ENAHQ8N8S7 591 aaPredicted RBP20.17■□□□□ 0.82
SYVN1-201ENST00000294256 WASF1Q92558 559 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
SYVN1-201ENST00000294256 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 CUTAO60888 179 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 DEXIO95424 95 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 PRDX5P30044 214 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
SYVN1-201ENST00000294256 C4AP0C0L4 1744 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 C4BP0C0L5 1744 aa20.17■□□□□ 0.82
SYVN1-201ENST00000294256 CDK11BP21127 795 aaKnown RBP20.16■□□□□ 0.82
SYVN1-201ENST00000294256 DHX58Q96C10 678 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 AK7Q96M32 723 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 HPSEQ9Y251 543 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 CREBRFQ8IUR6 639 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.82
SYVN1-201ENST00000294256 ZNF174Q15697 407 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 NBPF5PQ86XG9 351 aaPredicted RBP20.16■□□□□ 0.82
SYVN1-201ENST00000294256 ZNF384Q8TF68 577 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
SYVN1-201ENST00000294256 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
SYVN1-201ENST00000294256 BMP6P22004 513 aa20.15■□□□□ 0.82
SYVN1-201ENST00000294256 CCAR2Q8N163 923 aaKnown RBP20.15■□□□□ 0.82
SYVN1-201ENST00000294256 SHISA4Q96DD7 197 aa20.15■□□□□ 0.82
SYVN1-201ENST00000294256 EPSTI1Q96J88 318 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms