RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 DTNBO60941 627 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 TRPM2O94759 1503 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 CUTAO60888 179 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 GCP02774 474 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 PPFIBP2Q8ND30 876 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 UBE2Q2Q8WVN8 375 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 DAPK3O43293 454 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 TUBB2AQ13885 445 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 VPS52Q8N1B4 723 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 TUBB2BQ9BVA1 445 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 GJA3Q9Y6H8 435 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF365Q70YC5 407 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 CETN3O15182 167 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 FANCCQ00597 558 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 TESK2Q96S53 571 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 CTDSPL2Q05D32 466 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF594Q96JF6 807 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 IP6K1Q92551 441 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 APPBP2Q92624 585 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 SECISBP2LQ93073 1101 aaKnown RBP12.88□□□□□ -0.35
LAMA4-201ENST00000230538 HAUS7Q99871 368 aa12.88□□□□□ -0.35
LAMA4-201ENST00000230538 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 STK10O94804 968 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 HSPA1LP34931 641 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 ATP11AP98196 1134 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 GPAA1O43292 621 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 PDE8AO60658 829 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF75DP51815 510 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 ITIH3Q06033 890 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 RSRC1Q96IZ7 334 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 NUP153P49790 1475 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 DDX39AO00148 427 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 FAM173BQ6P4H8 233 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 NLRP12P59046 1061 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 C10orf67Q8IYJ2 551 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 AATFQ9NY61 560 aaKnown RBP eCLIP12.87□□□□□ -0.35
LAMA4-201ENST00000230538 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
LAMA4-201ENST00000230538 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 ADCY7P51828 1080 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 RRAGDQ9NQL2 400 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 DIS3L2Q8IYB7 885 aaKnown RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 MAST3O60307 1309 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 AOX1Q06278 1338 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 NOP56O00567 594 aaKnown RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
LAMA4-201ENST00000230538 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms