RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
GPATCH1-201ENST00000170564 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 PDCP20941 246 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 NTRK3Q16288 839 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 SGMS1Q86VZ5 419 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 IL1R1P14778 569 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
GPATCH1-201ENST00000170564 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 BBOX1O75936 387 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 CYP2D6P10635 497 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 TRDNQ13061 729 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 TRERF1Q96PN7 1200 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 CAMKK2Q96RR4 588 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 NUP62CLQ9H1M0 184 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 TPM3P06753 285 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
GPATCH1-201ENST00000170564 PRDM1O75626 825 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 FGRP09769 529 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 USP17L12C9JPN9 530 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 USP17L21D6R901 530 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 GGA1Q9UJY5 639 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 SEC23AQ15436 765 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
GPATCH1-201ENST00000170564 LIFRP42702 1097 aa13.08□□□□□ -0.31
GPATCH1-201ENST00000170564 CEBPZQ03701 1054 aaKnown RBP13.08□□□□□ -0.31
GPATCH1-201ENST00000170564 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.31
GPATCH1-201ENST00000170564 SH3RF3Q8TEJ3 882 aaPredicted RBP13.08□□□□□ -0.31
GPATCH1-201ENST00000170564 PHKBQ93100 1093 aa13.08□□□□□ -0.31
GPATCH1-201ENST00000170564 TYRO3Q06418 890 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 LIG1P18858 919 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 CNNM2Q9H8M5 875 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 OGFRQ9NZT2 677 aa13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
GPATCH1-201ENST00000170564 NID2Q14112 1375 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 FOCADQ5VW36 1801 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 NMT2O60551 498 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 KRT23Q9C075 422 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 DZIP1Q86YF9 867 aaKnown RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
GPATCH1-201ENST00000170564 GUCY1A2P33402 732 aa13.06□□□□□ -0.32
GPATCH1-201ENST00000170564 KRT85P78386 507 aa13.06□□□□□ -0.32
GPATCH1-201ENST00000170564 SHISA4Q96DD7 197 aa13.06□□□□□ -0.32
GPATCH1-201ENST00000170564 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
GPATCH1-201ENST00000170564 H3BQV1 296 aa13.06□□□□□ -0.32
GPATCH1-201ENST00000170564 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms