RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 WDR7Q9Y4E6 1490 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 STRN3Q13033 797 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 PEX19P40855 299 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 STX17P56962 302 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 MKL2Q9ULH7 1088 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 TSC22D1Q15714 1073 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 UTP11Q9Y3A2 253 aaKnown RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 OATP04181 439 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
HS3ST1-201ENST00000002596 HIF1AQ16665 826 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 HDXQ7Z353 690 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC26Q8TAB7 109 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 NUCB1Q02818 461 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TROQ12816 1431 aaPredicted RBP13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TAOK1Q7L7X3 1001 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 HIP1RO75146 1068 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 VGLL3A8MV65 326 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC38Q502W7 563 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
HS3ST1-201ENST00000002596 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 WHAMMP3Q1A5X7 153 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 Q6ZUG5 572 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 TNNC1P63316 161 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 GPIHBP1Q8IV16 184 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 SPOPO43791 374 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 KIF11P52732 1056 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 VSIG1Q86XK7 387 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 KIF9Q9HAQ2 790 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 AMOTL2Q9Y2J4 779 aa13.71□□□□□ -0.21
HS3ST1-201ENST00000002596 LDHBP07195 334 aaKnown RBP13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 TMED1Q13445 227 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 LIN9Q5TKA1 542 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 SYTL2Q9HCH5 934 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 SYT10Q6XYQ8 523 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 KRT82Q9NSB4 513 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
HS3ST1-201ENST00000002596 TBC1D8O95759 1140 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 LONP1P36776 959 aaKnown RBP13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 IQSEC3Q9UPP2 1182 aaPredicted RBP13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 NSD2O96028 1365 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 UBAP1LF5GYI3 381 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 KRT10P13645 584 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 TEKT2Q9UIF3 430 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 GNGT2O14610 69 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 SERPINB6P35237 376 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 MMEL1Q495T6 779 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 FGD4Q96M96 766 aa13.7□□□□□ -0.22
HS3ST1-201ENST00000002596 FAM95CA0A1B0GW59 222 aa13.69□□□□□ -0.22
HS3ST1-201ENST00000002596 PPP1R2P41236 205 aa13.69□□□□□ -0.22
HS3ST1-201ENST00000002596 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
HS3ST1-201ENST00000002596 DAAM1Q9Y4D1 1078 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms