RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Stx17Q9D0I4 301 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Tbc1d7Q9D0K0 293 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rad23aP54726 363 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Irf9Q61179 399 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ppp1r13bQ62415 1087 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Amotl2Q8K371 772 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Lrrc8cQ8R502 803 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Mylk2Q8VCR8 613 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 TnikP83510 1323 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Mcmdc2E9Q956 681 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gm10488Q4KL05 212 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Satb1Q60611 764 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 NntQ61941 1086 aaKnown RBP10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Klhl14Q69ZK5 630 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ppp4r3aQ6P2K6 820 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ccdc80Q8R2G6 949 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Snx1Q9WV80 522 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rapgef1Q3UHC1 1224 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Hand2Q61039 217 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ckap2lQ7TS74 745 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Tpcn1Q9EQJ0 817 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Pole3Q9JKP7 145 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ak2Q9WTP6 239 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Arhgap42B2RQE8 841 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Pde1bQ01065 535 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Skap1Q3UUV5 355 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gm5168Q4KL04 211 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Lmod1Q8BVA4 595 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 DymQ8CHY3 669 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 CacybpQ9CXW3 229 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Krt20Q9D312 431 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 LrgukQ9D5S7 820 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Pus7B7ZNL8 666 aaKnown RBP10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 GsnP13020 780 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gna11P21278 359 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Sept2P42208 361 aaKnown RBP10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gnat2P50149 354 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ifit2Q64112 472 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 AsphQ8BSY0 741 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 E330017A01RikQ8BU47 192 aa10.07□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Krt75Q8BGZ7 551 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Larp6Q8BN59 492 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Trim35Q8C006 501 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ero1aQ8R180 464 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Speer3W4VSP1 261 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Mroh7A2AVR2 1279 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Stx8O88983 236 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Stx2Q00262 289 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Vil1Q62468 827 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Arhgap10Q6Y5D8 786 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ces1aE9PYP1 563 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Flot1O08917 428 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Slc1a4O35874 532 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Abcb4P21440 1276 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Trim71Q1PSW8 855 aaKnown RBP10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Zfp202Q8C879 641 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 C130026I21RikQ8C898 291 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 ApobrQ8VBT6 942 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Bbs5Q9CZQ9 341 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gja8P28236 440 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Actn4P57780 912 aaKnown RBP10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Zscan22Q8BGS5 496 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ncaph2Q8BSP2 607 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ccdc68Q8BVC4 333 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Psmd2Q8VDM4 908 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Thap12Q9CUX1 758 aa10.06□□□□□ -0.8
Ptpre-204ENSMUST00000209979 IntuQ059U7 942 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 D130040H23RikQ8BII3 405 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Mtrf1lQ8BJU9 373 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Serpinb13Q8CDC0 389 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Creld2Q9CYA0 350 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 4930449I24RikQ9D5E3 319 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 NgdnQ9DB96 315 aaKnown RBP10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 EprsQ8CGC7 1512 aaKnown RBP10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rtl9Q32KG4 1339 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gbp4A4UUI3 631 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Spocd1B1ASB6 936 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Lonrf2B2RT44 518 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Krt4P07744 525 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 GphnQ8BUV3 769 aaKnown RBP10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Dbn1Q9QXS6 706 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 PapolbQ9WVP6 641 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Bpifb4A2BGH0 617 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Birc2Q62210 612 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gm14819Q62478 212 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Stkld1Q80YS9 662 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Eif3cQ8R1B4 911 aaKnown RBP10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Cplx3Q8R1B5 158 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Znf830Q8R1N0 363 aaKnown RBP10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Nde1Q9CZA6 344 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ccdc182Q9D9C6 152 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Igf1rQ60751 1373 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Zfp781Q0P5U5 243 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Arhgap17Q3UIA2 846 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Pex1Q5BL07 1284 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Adcy2Q80TL1 1090 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Zbtb41Q811F1 908 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rps6kb1Q8BSK8 525 aa10.05□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rhobtb1Q9DAK3 695 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms