RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Ift122Q6NWV3 1182 aa16.67■□□□□ 0.26
Vcan-205ENSMUST00000159337 Lrrc1Q80VQ1 524 aa16.67■□□□□ 0.26
Vcan-205ENSMUST00000159337 Cul4bA2A432 970 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 PnnO35691 725 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Cep112Q5PR68 954 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Mrps31Q61733 384 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Adck2Q6NSR3 617 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Sval3Q76I99 144 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 GphnQ8BUV3 769 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 4930572O03RikQ8C5Y0 211 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Wasf1Q8R5H6 559 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Emilin1Q99K41 1017 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Krt23Q99PS0 422 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Hic2Q9JLZ6 619 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 FAM186AQ9D9R9 1790 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Zbtb21E9Q444 1094 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 LbrQ3U9G9 626 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Pex1Q5BL07 1284 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Eif3bQ8JZQ9 803 aaKnown RBP16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Krt84Q99M73 603 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Ccdc83Q9D4V3 305 aa16.66■□□□□ 0.26
Vcan-205ENSMUST00000159337 Snapc4Q8BP86 1333 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Gm21671G3UY31 267 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Ftl2P49945 183 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Psmb7P70195 277 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Tubb5P99024 444 aaKnown RBP16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Plekhf1Q3TB82 279 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Taf6lQ8R2K4 616 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 NapgQ9CWZ7 312 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 SelenooQ9DBC0 667 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Kcnq5Q9JK45 933 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Itga2bQ9QUM0 1033 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 A0A1W2P6Q8 802 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Gm9048A0A1W2P7H4 802 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 A0A1W2P7S8 802 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 A0A1W2P7Z8 802 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Gm9046A0A1W2P855 802 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Rgs22G3UYX5 1258 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Atp8a2P98200 1148 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Cdc5lQ6A068 802 aaKnown RBP16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Usp49Q6P9L4 685 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Pip4k2bQ80XI4 416 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Ttc19Q8CC21 365 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Vps53Q8CCB4 832 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Pcdha7Q91Y13 937 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Ube3bQ9ES34 1070 aa16.65■□□□□ 0.26
Vcan-205ENSMUST00000159337 Myh1Q5SX40 1942 aa16.64■□□□□ 0.26
Vcan-205ENSMUST00000159337 Setdb1O88974 1307 aa16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gpt2Q8BGT5 522 aa16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Kcnj14Q8JZN3 434 aa16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Tcp11l2Q8K1H7 517 aa16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Syf2Q9D198 242 aaKnown RBP16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Sipa1l3G3X9J0 1776 aa16.64■□□□□ 0.25
Vcan-205ENSMUST00000159337 Rexo5D3YW29 759 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ranbp1P34022 203 aaKnown RBP16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gucy2cQ3UWA6 1072 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Klra4Q60651 263 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 HrQ61645 1182 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Myl10Q62082 202 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cfap100Q80VN0 613 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Csrnp2Q8BGQ2 534 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Zkscan8Q8BSL0 588 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Mfap3Q922T2 349 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Mast3Q3U214 1321 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Arap2Q8BZ05 1703 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Il7P10168 154 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Slc44a1Q6X893 653 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cep128Q8BI22 1102 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Nop9Q8BMC4 636 aaKnown RBP16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Rasal3Q8C2K5 1041 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Slc5a1Q8C3K6 665 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Smc2Q8CG48 1191 aaKnown RBP16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Tbc1d7Q9D0K0 293 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 CluhQ5SW19 1315 aa16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Myh6Q02566 1938 aaKnown RBP16.63■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm21698A0A087WQP8 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Scgb2b19J3QM75 112 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Card10P58660 1021 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Krt86P97861 486 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cct6bQ61390 531 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Rbm12b2Q66JV4 834 aaKnown RBP16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Clic6Q8BHB9 596 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Zswim4Q8C7B8 1101 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gigyf1Q99MR1 1044 aaKnown RBP16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 ToporslQ9D2F8 683 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Cfap45Q9D9U9 551 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Myh2G3UW82 1942 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm21663A0A0G2JE01 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 4932429P05RikA2ADI4 785 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm7361D3Z6R1 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 5031410I06RikE9Q4E0 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm1979E9QAN3 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm5862K7N5V5 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Gm10220K7N660 267 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Smarcc1P97496 1104 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Kiaa1468Q148V7 1216 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Ccdc174Q3U155 467 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Nol10Q5RJG1 687 aaKnown RBP16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 Nlrp9aQ66X03 949 aa16.62■□□□□ 0.25
Vcan-205ENSMUST00000159337 9230110C19RikQ8CC70 267 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms