RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Nek5Q7TSC3 627 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zfp202Q8C879 641 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 KynuQ9CXF0 464 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mapkapk5O54992 473 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mybpc2Q5XKE0 1136 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ccdc148Q6P5U8 527 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Fam160b2Q80YR2 744 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cdc23Q8BGZ4 597 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Slfnl1Q8BHW9 410 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Kiaa1524Q8BWY9 907 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Hgh1Q8C3I8 393 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Paip2Q9D6V8 124 aa9.96□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Pik3c2bE9QAN8 1632 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sult6b1P0CC03 303 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Fam170aQ66LM6 333 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Kif2bQ8C0N1 668 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Zfp317Q8C0Q5 607 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Krt84Q99M73 603 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 NapgQ9CWZ7 312 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cep83Q9D5R3 692 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cfap45Q9D9U9 551 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Dusp10Q9ESS0 483 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Aox2Q5SGK3 1345 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Rgs22G3UYX5 1258 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gm21969J3QJZ1 289 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ets1P27577 440 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 XpcP51612 930 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ppp4r3aQ6P2K6 820 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Fmnl3Q6ZPF4 1028 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tubb2aQ7TMM9 445 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Lrsam1Q80ZI6 727 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Necab1Q8BG18 352 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tubb2bQ9CWF2 445 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Trip6Q9Z1Y4 480 aa9.96□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Abcc12Q80WJ6 1366 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Uhrf1bp1B2KF50 1429 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 FntaQ61239 377 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Bend3Q6PAL0 825 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tmem87aQ8BXN9 555 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tango6Q8C3S2 1079 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 GzmnQ920S1 248 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tlr8P58682 1032 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Atp8b1Q148W0 1251 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 PsdQ5DTT2 1024 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Vps54Q5SPW0 977 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cplx4Q80WM3 160 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Hpcal4Q8BGZ1 191 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Hdac9Q99N13 588 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Stk36Q69ZM6 1316 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Prl3d2F6R3P9 224 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tlr7P58681 1050 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Fhod1Q6P9Q4 1197 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ccdc40Q8BI79 1192 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Fsd2Q8BZ52 692 aa9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Rbm19Q8R3C6 952 aaKnown RBP9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Acot9Q9R0X4 439 aaKnown RBP9.95□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Dapk3O54784 448 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ftl2P49945 183 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Abtb2Q7TQI7 1024 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cct8l1Q80YT3 562 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 U2af1l4Q8BGJ9 220 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Myl6bQ8CI43 207 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 ParnQ8VDG3 624 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Pcdhb5Q91XZ5 792 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 NpcdF8VQB8 469 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ncoa5Q91W39 579 aaKnown RBP9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sel1lQ9Z2G6 790 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Abca8aQ8K442 1620 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sycp2lA0A0M3U1B0 842 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ap1g2O88512 791 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Mex3cQ05A36 652 aaKnown RBP9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Susd4Q8BH32 490 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Rassf2Q8BMS9 326 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 LgsnQ8CIX8 563 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Spats2Q8K1N4 545 aaKnown RBP9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Spire2Q8K1S6 718 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 RabggtaQ9JHK4 567 aa9.94□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Alpk3Q924C5 1678 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sdc2P43407 202 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Slc30a9Q5IRJ6 567 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Map3k12Q60700 888 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 HellsQ60848 821 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Popdc2Q9ES82 367 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tnip1Q9WUU8 647 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ccdc152E9PX14 254 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Klra1P20937 262 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ncf1Q09014 390 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cdcp1Q5U462 833 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ovgp1Q62010 721 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Traf3ip3Q8C0G2 513 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ccdc150Q8CDI7 1110 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 MthfsQ9D110 203 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 AvenQ9D9K3 342 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Adarb2Q9JI20 745 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Add2Q9QYB8 725 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Itsn2Q9Z0R6 1659 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ugt1a5B2RT14 529 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 CtcfQ61164 736 aaKnown RBP9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tgfb1i1Q62219 461 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Trim52Q8CDV4 233 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms