RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 U2af2P26369 475 aaKnown RBP16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Stmn2P55821 179 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Sox13Q04891 613 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Znf365Q8BG89 408 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Lrrd1Q8C0R9 853 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Riox2Q8CD15 465 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 LpxnQ99N69 386 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Elf2Q9JHC9 593 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Ccnt1Q9QWV9 724 aaKnown RBP16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Prl7a2O54831 253 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Plbd2Q3TCN2 594 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Pabpn1lQ5XFR0 273 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 RbsnQ80Y56 783 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Hfm1D3Z4R1 1434 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 AU022751B1B0V2 589 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Fchsd1Q6PFY1 688 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Golga1Q9CW79 758 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Abcc4E9Q236 1325 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Eef1dP57776 281 aaKnown RBP16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Agbl1Q09M05 972 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Cct6bQ61390 531 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Iws1Q8C1D8 766 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 SnrkQ8VDU5 748 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Actn2Q9JI91 894 aa16.41■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 AatkQ80YE4 1365 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Eif4a1P60843 406 aaKnown RBP16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Znf667Q2TL60 609 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Herc4Q6PAV2 1057 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Sgsm2Q80U12 1005 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Serpinb12Q9D7P9 423 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Golga5Q9QYE6 729 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Uggt2E9Q4X2 1504 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Ccdc57Q6PHN1 1016 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 NelfbQ8C4Y3 580 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 CactinQ9CS00 772 aaKnown RBP16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Xpo4Q9ESJ0 1151 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Psma7Q9Z2U0 248 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Q4VA45 678 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Kcna6Q61923 529 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Retreg2Q6NS82 541 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Lonp1Q8CGK3 949 aaKnown RBP16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Cabp7Q91ZM8 215 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Tsnaxip1Q99P25 704 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 IqcdQ9D3V1 458 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Fmn2Q9JL04 1578 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Lrrc36Q3V0M2 755 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Slc7a6osQ7TPE5 306 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 HhatQ8BMT9 499 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Gtpbp10Q8K013 366 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Pdzd9Q9D9M4 266 aa16.4■□□□□ 0.22
Pcdh20-201ENSMUST00000061628 Rps6ka1P18653 724 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Gm5168Q4KL04 211 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Jarid2Q62315 1234 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Rsad2Q8CBB9 362 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 SncbQ91ZZ3 133 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Trpc3Q9QZC1 836 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Sept3Q9Z1S5 350 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Ano8Q6PB70 1060 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Atp6v0a4Q920R6 833 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 EmbP21995 330 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Psmc4P54775 418 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Mex3cQ05A36 652 aaKnown RBP16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 VrtnQ3SYK4 740 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Capn12Q9ER56 720 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Speer3W4VSP1 261 aa16.39■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Asxl2Q8BZ32 1370 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 PrphP15331 475 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Ttll12Q3UDE2 639 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Rhpn1Q61085 643 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Slc4a8Q8JZR6 1089 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Mettl5Q8K1A0 209 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Znf830Q8R1N0 363 aaKnown RBP16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Tbc1d9bQ5SVR0 1263 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Trim28Q62318 834 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 PaoxQ8C0L6 504 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Scaf11E9PZM7 1456 aaKnown RBP16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Ranbp1P34022 203 aaKnown RBP16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Nlrx1Q3TL44 975 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 1700029H14RikE9PY36 240 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Gm5169Q5M8P2 212 aa16.38■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Arhgef40Q3UPH7 1517 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Zfp51Q3U4L8 781 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 RilpQ5ND29 369 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Atp1a2Q6PIE5 1020 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Mapkapk5O54992 473 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Foxp1P58462 705 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Xpo5Q924C1 1204 aaKnown RBP16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Tex19.1Q99MV2 351 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Pdzd4Q9QY39 772 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Npc1l1Q6T3U4 1333 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Usp19Q3UJD6 1360 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Zscan25B2RX31 543 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Trove2O08848 538 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Zbtb38Q3LR78 1197 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Mdh1bQ5F204 500 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Mtss1lQ6P9S0 715 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Spata16Q8C636 571 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Klhl40Q9D783 621 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Ubn2Q80WC1 1314 aa16.37■□□□□ 0.21
Pcdh20-201ENSMUST00000061628 Kdm5cP41230 1554 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms