RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Ttll4Q80UG8 1193 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 DymQ8CHY3 669 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Zbed3Q9D0L1 228 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 WtapQ9ER69 396 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Igsf9bE9PZ19 1328 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Rpusd2Q149F1 553 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Rbm26Q6NZN0 1012 aaKnown RBP9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Clec16aQ80U30 1036 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Otop3Q80UF9 577 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Rnf214Q8BFU3 668 aaKnown RBP9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Haus7Q8BKT8 364 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Dydc2Q9D3X8 139 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Mmel1Q9JLI3 765 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Dctpp1Q9QY93 170 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 CluhQ5SW19 1315 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Atp6v0a2P15920 856 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Ftl1P29391 183 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Pfkfb1P70266 471 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Insm1Q63ZV0 521 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Atp1a3Q6PIC6 1013 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 9230110C19RikQ8CC70 267 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Rtn1Q8K0T0 780 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Ubxn4Q8VCH8 506 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Trim44Q9QXA7 346 aa9.22□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Znf326O88291 580 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 DSCC1Q14AI0 399 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Vars2Q3U2A8 1060 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Washc4Q3UMB9 1173 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Usp13Q5BKP2 858 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Pknox2Q8BG99 474 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Kri1Q8VDQ9 704 aaKnown RBP9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Rrp9Q91WM3 475 aaKnown RBP9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Tbc1d7Q9D0K0 293 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Etnk1Q9D4V0 363 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Hmgn5Q9JL35 406 aa9.21□□□□□ -0.93
Ccdc60-201ENSMUST00000050178 Prss40A6H6T1 365 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Acad12D3Z7X0 555 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Casp1P29452 402 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 NfixP70257 488 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Nell2Q61220 819 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Q8BZJ8 459 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Zfp202Q8C879 641 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Plekhg2Q6KAU7 1340 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ampd3O08739 766 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Aco1P28271 889 aaKnown RBP9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ptpn12P35831 775 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 VeztQ3ZK22 780 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Mum1l1Q4VA55 681 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 LrmpQ60664 539 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Tm4sf1Q64302 202 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Rrp12Q6P5B0 1295 aaKnown RBP9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Tcp11l1Q8BTG3 509 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ttc12Q8BW49 704 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gtf3c5Q8R2T8 520 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 CpvlQ9D3S9 478 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Vnn1Q9Z0K8 512 aa9.21□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Tbc1d8bA3KGB4 1114 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Mctp1E9PV86 951 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Atp2b1G5E829 1220 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Sema3fO88632 785 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Scg2Q03517 617 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ncbp1Q3UYV9 790 aaKnown RBP9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Slc27a1Q60714 646 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Tbc1d5Q80XQ2 815 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Grin2dQ03391 1323 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gm7347D3YYI9 267 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Speer4aF8VPX6 267 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Msh3P13705 1091 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Nucb2P81117 420 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Psg29Q3URN6 468 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gzf1Q4VBD9 706 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Kiaa1524Q8BWY9 907 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Frmpd4A2AFR3 1320 aa9.2□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gm43738A0A0G2JEA5 862 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Btn2a2A4QPC6 514 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Pfkfb3A7UAK5 555 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Fbln2P37889 1221 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Acnat2Q8BGG9 420 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gpatch3Q8BIY1 525 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Kiaa1468Q148V7 1216 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ppp1r21Q3TDD9 780 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Spg7Q3ULF4 781 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Adck2Q6NSR3 617 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Kcnk13Q8R1P5 405 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Trmt44Q9D2Q2 713 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Mrpl12Q9DB15 201 aaKnown RBP9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Jag1Q9QXX0 1218 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Brca1P48754 1812 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Sycp2lA0A0M3U1B0 842 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Gm36210A0A1B0GS00 229 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Mapkapk5O54992 473 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Trappc10Q3TLI0 1259 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 E2f4Q8R0K9 410 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Ush1cQ9ES64 910 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Zmym2Q9CU65 1376 aa9.19□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Prdm11A2AGX3 565 aa9.18□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Nap1l2P51860 460 aa9.18□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Tlr8P58682 1032 aa9.18□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Cplx2P84086 134 aa9.18□□□□□ -0.94
Ccdc60-201ENSMUST00000050178 Myl10Q62082 202 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms