RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gucy2cQ3UWA6 1072 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pdcd6ipQ9WU78 869 aaKnown RBP16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Acap3Q6NXL5 833 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Usp49Q6P9L4 685 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Clic6Q8BHB9 596 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tmx4Q8C0L0 335 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 PpanQ91YU8 470 aaKnown RBP16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Vps16Q920Q4 839 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Krt23Q99PS0 422 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cfap45Q9D9U9 551 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Irx5Q9JKQ4 484 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 TnrQ8BYI9 1358 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 TsksO54887 585 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cct6bQ61390 531 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Safb2Q80YR5 991 aaKnown RBP16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Alx1Q8C8B0 326 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Kcnj14Q8JZN3 434 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Taf6lQ8R2K4 616 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tbc1d7Q9D0K0 293 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 ToporslQ9D2F8 683 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 A0A0U1RNP2 1173 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ppfia4B8QI36 1187 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Nkx2-5P42582 318 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Myl10Q62082 202 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Sval3Q76I99 144 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ncoa5Q91W39 579 aaKnown RBP16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Itga2bQ9QUM0 1033 aa16.78■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Col3a1P08121 1464 aa16.77■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ctdp1Q7TSG2 960 aa16.77■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Vipas39Q8BGQ1 491 aa16.77■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Flad1Q8R123 492 aa16.77■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Hic2Q9JLZ6 619 aaKnown RBP16.77■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Dnajc21E9Q8D0 531 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Top1Q04750 767 aaKnown RBP16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Zmym1Q3TJB1 983 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Edrf1Q6GQV7 1239 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Asic4Q7TNS7 539 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Sdad1Q80UZ2 687 aaKnown RBP16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Csrnp2Q8BGQ2 534 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Def6Q8C2K1 630 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Trim52Q8CDV4 233 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Tspyl4Q8VD63 406 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Thap2Q9D305 217 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Egfl6Q9JJZ5 550 aa16.77■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Cul4bA2A432 970 aaKnown RBP16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Il7P10168 154 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Cyp2d9P11714 504 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Myd88P22366 296 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Cct5P80316 541 aaKnown RBP16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ppp1r7Q3UM45 361 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Smc2Q8CG48 1191 aaKnown RBP16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Cgref1Q8R1U2 281 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Wasf1Q8R5H6 559 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Mfap3Q922T2 349 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 AdarQ99MU3 1178 aaKnown RBP16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ehd4Q9EQP2 541 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Mkrn1Q9QXP6 481 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Zfand4D3Z3C6 739 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Pcdhb9E9Q5G2 828 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 AK157302I3ITR1 129 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Zbtb38Q3LR78 1197 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Epn1Q80VP1 575 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Phc3Q8CHP6 981 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Sash3Q8K352 380 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Efcab2Q9CQ46 164 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Isca1Q9D924 129 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Uso1Q9Z1Z0 959 aaKnown RBP16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ccne2Q9Z238 404 aa16.76■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Med23Q80YQ2 1367 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Gm1979E9QAN3 267 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Scgb2b19J3QM75 112 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Zkscan3Q91VW9 553 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Gpr108Q91WD0 569 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Prpf6Q91YR7 941 aaKnown RBP16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Krt84Q99M73 603 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Fam217aQ9D9W6 419 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Setdb1O88974 1307 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 IkbkbO88351 757 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Gtf2f1Q3THK3 508 aaKnown RBP16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Cep128Q8BI22 1102 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Rasal3Q8C2K5 1041 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ttc19Q8CC21 365 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Sirt2Q8VDQ8 389 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 SyncQ9EPM5 470 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ltb4r2Q9JJL9 360 aa16.75■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Vps53Q8CCB4 832 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Q8K2W9 541 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Vmn1r218Q8R261 298 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Fam213aQ9CYH2 218 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Fam50bQ9WTJ8 334 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Foxn2E9Q7L6 429 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Adck2Q6NSR3 617 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Fam160b2Q80YR2 744 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Apol10aQ8CCA5 318 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Emilin1Q99K41 1017 aa16.74■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 4932429P05RikA2ADI4 785 aa16.73■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Tcp11Q01755 566 aa16.73■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Ckap2Q3V1H1 664 aa16.73■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Olfr121Q5CZY0 321 aa16.73■□□□□ 0.27
Ushbp1-201ENSMUST00000049184 Rbm12b2Q66JV4 834 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms