RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tnip1Q9WUU8 647 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 AsnsQ61024 561 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Nop53Q8BK35 484 aaKnown RBP13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 PpardP35396 440 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gpbp1Q6NXH3 473 aaKnown RBP13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 WaslQ91YD9 501 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Atp12aQ9Z1W8 1035 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gjc1P28229 396 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Pus3Q9JI38 481 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Cps1Q8C196 1500 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Tdo2P48776 406 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Nlrx1Q3TL44 975 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Brd3Q8K2F0 726 aaKnown RBP13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Sos2Q02384 1333 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gm5592Q3V0A6 857 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Krt15Q61414 452 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Galnt17Q7TT15 598 aa13.4□□□□□ -0.26
Pcif1-201ENSMUST00000041643 DnmbpQ6TXD4 1580 aa13.4□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Serpinc1P32261 465 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Slc38a10Q5I012 1090 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Kdm1aQ6ZQ88 853 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Efhd1Q9D4J1 240 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 NcapgE9PWG6 1004 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm38392E9Q2A2 434 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Apol10bG3X9K7 334 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Snx25Q3ZT31 840 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 GnptabQ69ZN6 1235 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Sptlc3Q8BG54 563 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Slx1bQ8BX32 270 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Zc3h13E9Q784 1729 aaKnown RBP13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Usp42B2RQC2 1324 aaKnown RBP13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Vwa3bJ9JI28 736 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 GmnnO88513 206 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Rhpn1Q61085 643 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cd3dP04235 173 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Abcb4P21440 1276 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Foxp1P58462 705 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Spag5Q7TME2 1165 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Maats1Q8BRC6 783 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gtf3c5Q8R2T8 520 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cetn2Q9R1K9 172 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Il7P10168 154 aa13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 StrbpQ91WM1 672 aaKnown RBP13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nop2Q922K7 793 aaKnown RBP13.39□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Uri1Q3TLD5 531 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Igbp1Q61249 340 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ano6Q6P9J9 911 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tmem179Q8BHH9 233 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 VmacQ8BP01 174 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Lrrd1Q8C0R9 853 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Pde5aQ8CG03 865 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tbc1d23Q8K0F1 684 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ppil4Q9CXG3 492 aaKnown RBP13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccne2Q9Z238 404 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Mcm7Q61881 719 aaKnown RBP13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Bola3Q8CEI1 110 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Vmn1r199Q8R280 367 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tab2Q99K90 693 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ltb4r2Q9JJL9 360 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Myo3bQ1EG27 1305 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ppm1eQ80TL0 749 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Zfp202Q8C879 641 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nod2Q8K3Z0 1020 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccdc89Q9DA73 370 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Zfp853A0A1D5RM95 733 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Znf394Q9Z1D9 521 aa13.38□□□□□ -0.27
Pcif1-201ENSMUST00000041643 AW822073A0A0N4SUK1 652 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Copb2O55029 905 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Fdx1P46656 188 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Hmgb1P63158 215 aaKnown RBP13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tcerg1lQ3B807 590 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Prdm2A2A7B5 1709 aaKnown RBP13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Rrp1P56183 494 aaKnown RBP13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cep135Q6P5D4 1140 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Dmrtc1Q9D9R7 182 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 IcoslgQ9JHJ8 322 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Add2Q9QYB8 725 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tmem131lQ3U3D7 1597 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Pik3c2bE9QAN8 1632 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 A0A1W2P6Q8 802 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm9048A0A1W2P7H4 802 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 A0A1W2P7Z8 802 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm9046A0A1W2P855 802 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Svs3aF2Z472 265 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm10378F6XQQ1 160 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Kcnj4P52189 445 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Hspa4Q61316 841 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Slc44a1Q6X893 653 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Hook3Q8BUK6 718 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tktl2Q9D4D4 627 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm20425E9Q035 978 aaKnown RBP13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 SrprbP47758 269 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cdk5rap2Q8K389 1822 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm13023A2A8N2 498 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nucb2P81117 420 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Mtss1lQ6P9S0 715 aa13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nxf7Q80SZ6 620 aaKnown RBP13.37□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Lbhd1A0A087WPA0 259 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccdc162pQ0VG85 912 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gpr162Q3UN16 588 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms