RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Oxr1Q4KMM3 866 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Gbp4Q61107 620 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Strip1Q8C079 837 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Pcdhb2Q91Y00 799 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 HibadhQ99L13 335 aaKnown RBP8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Tnpo2Q99LG2 887 aaKnown RBP8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Cdk12Q14AX6 1484 aaKnown RBP8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 MypnQ5DTJ9 1315 aa8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 Npc1l1Q6T3U4 1333 aa8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 EspnlQ3UYR4 1005 aa8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mettl5Q8K1A0 209 aa8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ccar2Q8VDP4 922 aaKnown RBP8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tmco5aQ9D9D5 303 aa8.4□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ppp1r9aH3BJD6 1292 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tlr7P58681 1050 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ctnna3Q65CL1 895 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ppp6r3Q922D4 844 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Smco2Q9DA21 347 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Uso1Q9Z1Z0 959 aaKnown RBP8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 A0A1W2P6Q8 802 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gm9048A0A1W2P7H4 802 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 A0A1W2P7Z8 802 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gm9046A0A1W2P855 802 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 ClgnP52194 611 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Smarcad1Q04692 1021 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rhpn1Q61085 643 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Asap2Q7SIG6 958 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mrps25Q9D125 171 aaKnown RBP8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Dot1lQ6XZL8 1540 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Prss51A0A286YDY8 319 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gm10378F6XQQ1 160 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Cfap73J3QPZ5 306 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Capn2O08529 700 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Parp2O88554 559 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mindy4Q3UQI9 744 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gimap7Q8R379 293 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Taf12Q8VE65 161 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Smc1bQ920F6 1248 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Kdm8Q9CXT6 414 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rsrc1Q9DBU6 334 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ehd4Q9EQP2 541 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 DonsonQ9QXP4 560 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gm38392E9Q2A2 434 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Atp2b1G5E829 1220 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rad51bO35719 350 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rnaseh1O70338 285 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Dnm2P39054 870 aaKnown RBP8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ddx49Q4FZF3 480 aaKnown RBP8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Pex1Q5BL07 1284 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ripor2Q80U16 1078 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Rnf187Q8BFX1 236 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 Mmel1Q9JLI3 765 aa8.39□□□□□ -1.07
Usp40-201ENSMUST00000040783 PtpruB1AUH1 1446 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tcerg1lQ3B807 590 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tgfb1i1Q62219 461 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Dpp8Q80YA7 892 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Spats2Q8K1N4 545 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Brd3Q8K2F0 726 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Glrx3Q9CQM9 337 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ccdc89Q9DA73 370 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ano3A2AHL1 981 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ftl1P29391 183 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Plcb3P51432 1234 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Snx13Q6PHS6 957 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 SfpqQ8VIJ6 699 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Akap8Q9DBR0 687 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Kiaa1107Q80TK0 1369 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 1700006A11RikB9EHI3 544 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Cfap70D3YVL2 1141 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 GmnnO88513 206 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 PparaP23204 468 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Ankrd40Q5SUE8 363 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Srp68Q8BMA6 625 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Taf5lQ91WQ5 589 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Pold4Q9CWP8 107 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tpd52l2Q9CYZ2 220 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 NkapQ9D0F4 415 aaKnown RBP8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tldc2A2ACG1 198 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Gm1993A6X8I0 212 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 SlxD3Z347 212 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tagap1P0CAX8 505 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Armc2Q3URY6 854 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Fgfr1opQ66JX5 399 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tmem87aQ8BXN9 555 aa8.38□□□□□ -1.07
Usp40-201ENSMUST00000040783 Pde11aP0C1Q2 933 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Lin9Q8C735 542 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Tsr2Q8C8T8 191 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Afg3l2Q8JZQ2 802 aaKnown RBP8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Spire2Q8K1S6 718 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Cxcl11Q9JHH5 100 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Znf521Q6KAS7 1311 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Depdc1bQ8BH88 529 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Maats1Q8BRC6 783 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 4930504O13RikQ8C5Z9 145 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Pym1Q8CHP5 203 aaKnown RBP8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Nlrp5Q9R1M5 1163 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Aox1O54754 1333 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 NhsB1AV60 1647 aa8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Lamc1P02468 1607 aaKnown RBP8.37□□□□□ -1.07
Usp40-201ENSMUST00000040783 Lrrc23O35125 340 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms