RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Zscan18E9PUD6 809 aa18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Rtel1Q0VGM9 1203 aa18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Tsr2Q8C8T8 191 aa18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Apol11aE9PZG0 334 aa18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Parp1P11103 1013 aaKnown RBP18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Sar1bQ9CQC9 198 aa18.37■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Zap70P43404 618 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Slc7a6osQ7TPE5 306 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 HscbQ8K3A0 234 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 SyncQ9EPM5 470 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Trim42Q9D2H5 723 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 FibpQ9JI19 357 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Azi2Q9QYP6 405 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 SphkapQ6NSW3 1687 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Fhdc1Q3ULZ2 1149 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Prr16A3KMN5 304 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Psmb7P70195 277 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Zmynd15Q8C0R7 736 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 C130026I21RikQ8C898 291 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Rad17Q6NXW6 688 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Zfp202Q8C879 641 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Capn12Q9ER56 720 aa18.36■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Kifc2O08672 792 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Efcab2Q9CQ46 164 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Atp7aQ64430 1491 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Nuf2Q99P69 463 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Atp1a2Q6PIE5 1020 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Tnpo2Q99LG2 887 aaKnown RBP18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ca8P28651 291 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Snrpa1P57784 255 aaKnown RBP18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ccdc160Q3UYG1 323 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Gm14685Q52KH6 695 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Krt71Q9R0H5 524 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 ZfaP23607 742 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Cnot10Q8BH15 744 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Myl6bQ8CI43 207 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Polr2dQ9D7M8 142 aaKnown RBP18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Cd274Q9EP73 290 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Camsap3Q80VC9 1252 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Rabep2Q91WG2 554 aa18.35■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 PpardP35396 440 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Rbm12b2Q66JV4 834 aaKnown RBP18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ddx41Q91VN6 622 aaKnown RBP18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ankrd13dQ6PD24 605 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Tab2Q99K90 693 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Znf568E9PYI1 671 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Stk10O55098 966 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Serpinb1cQ5SV42 375 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 PtprgQ05909 1442 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Cul7Q8VE73 1689 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Slc12a2P55012 1205 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Krt14Q61781 484 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 TnksQ6PFX9 1320 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Akr1c19G3X9Y6 323 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ercc5P35689 1170 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 AdpgkQ8VDL4 496 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 PcQ05920 1178 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Gngt1Q61012 74 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Galnt17Q7TT15 598 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Kiaa1024Q8K3V7 917 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Slc26a7Q8R2Z3 656 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 H2-OaQ9QWV1 250 aa18.34■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Hspa8P63017 646 aaKnown RBP18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Arhgap10Q6Y5D8 786 aa18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 ParnQ8VDG3 624 aa18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Tpx2A2APB8 745 aaKnown RBP18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Gm6121L7MUF1 212 aa18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 CltaO08585 235 aa18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Ubash3aQ3V3E1 624 aa18.33■□□□□ 0.53
Ccdc88a-201ENSMUST00000040182 Flot1O08917 428 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ccdc68Q8BVC4 333 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Rabgap1A2AWA9 1064 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm4758L7N258 96 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Eef1bO70251 225 aaKnown RBP18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Fgd5Q80UZ0 1219 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pfdn6Q03958 127 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pja2Q80U04 707 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Zkscan16A2ALW2 728 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm5169Q5M8P2 212 aa18.33■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Micall2Q3TN34 1009 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Prune1Q8BIW1 454 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Rps6ka2Q9WUT3 733 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Anks6Q6GQX6 883 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm4297D3YWB7 211 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Mdm2P23804 489 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Myl7Q9QVP4 175 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Clasp1Q80TV8 1535 aaKnown RBP18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 CaluO35887 315 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Q8BZJ8 459 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Psma7Q9Z2U0 248 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tdo2P48776 406 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ctnna1P26231 906 aaKnown RBP18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Card10P58660 1021 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kdm3bQ6ZPY7 1562 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Hgh1Q8C3I8 393 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 9230110C19RikQ8CC70 267 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Amotl2Q8K371 772 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 MycbpQ9EQS3 103 aa18.32■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Rnf168Q80XJ2 565 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kif2bQ8C0N1 668 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms