RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Btn2a2A4QPC6 514 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Slc27a3O88561 667 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 SdsQ8VBT2 327 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Adarb2Q9JI20 745 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 ByslO54825 436 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Mapkapk5O54992 473 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ranbp1P34022 203 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tax1bp1Q3UKC1 814 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 ErmnQ5EBJ4 281 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Krt15Q61414 452 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Acnat2Q8BGG9 420 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Frat2Q8K025 231 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Hexim1Q8R409 356 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 PpanQ91YU8 470 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tnip1Q9WUU8 647 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Znf541Q0GGX2 1363 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Col20a1Q923P0 1320 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Sh3bp1P55194 680 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Asic1Q6NXK8 526 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fam177a1Q8BR63 207 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ncoa5Q91W39 579 aaKnown RBP11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Hirip3Q8BLH7 601 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Lmbrd2Q8C561 694 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fbxo3Q9DC63 480 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Rimbp3Q3V0F0 1606 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Arhgap33Q80YF9 1305 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Palm3A2TJV2 734 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Pde8bE9Q4S1 865 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Cetn1P41209 172 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fbxo41Q6NS60 873 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ribc1Q9D0B8 379 aa11.15□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gm5624F6ZZG8 207 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gm4340L7N2C4 268 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kdm1aQ6ZQ88 853 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Zswim4Q8C7B8 1101 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Paf1Q8K2T8 535 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Rbm19Q8R3C6 952 aaKnown RBP11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cdk5rap2Q8K389 1822 aa11.15□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Diaph1O08808 1255 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Serpinc1P32261 465 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ripor2Q80U16 1078 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cul5Q9D5V5 780 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Klhl40Q9D783 621 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tacc3Q9JJ11 631 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Prpf40aQ9R1C7 953 aaKnown RBP11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Adcy9P51830 1353 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Abcc4E9Q236 1325 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Exoc3l2D3YUP5 789 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Dnajc21E9Q8D0 531 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Mnat1P51949 309 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Specc1Q5SXY1 1067 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cep128Q8BI22 1102 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Sos2Q02384 1333 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 1700113H08RikE9Q9Q5 327 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cacna2d4Q5RJF7 1116 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Clca2Q8BG22 942 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pik3ap1Q9EQ32 811 aa11.14□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ccdc152E9PX14 254 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Hspa2P17156 633 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kif22Q3V300 660 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 L1td1Q587J6 782 aaKnown RBP11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cplx4Q80WM3 160 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cyp4f39Q8BGU0 532 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 AdnpQ9Z103 1108 aaKnown RBP11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kif13aQ9EQW7 1749 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Rbm12b2Q66JV4 834 aaKnown RBP11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tekt3Q6X6Z7 490 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gm44503E9PYU5 387 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tuft1O08970 390 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Myo1aO88329 1043 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gpr182P43142 395 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Cyp24a1Q64441 514 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 SltmQ8CH25 1031 aaKnown RBP11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 RictorQ6QI06 1708 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gm5934D3Z4U6 212 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Ano9P86044 747 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Tsga10Q6NY15 697 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Lrsam1Q80ZI6 727 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Stac3Q8BZ71 360 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 OscarQ8VBT3 265 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Taf5lQ91WQ5 589 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Aox4Q3TYQ9 1336 aa11.13□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Spata31d1bE9QA57 1361 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Igf2bp2Q5SF07 592 aaKnown RBP11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Oxsr1Q6P9R2 527 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Asic3Q6X1Y6 530 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Asap2Q7SIG6 958 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Fermt2Q8CIB5 680 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kcnk13Q8R1P5 405 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Npc1l1Q6T3U4 1333 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Pex1Q5BL07 1284 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Trim6Q8BGE7 488 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Me3Q8BMF3 604 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 4921504E06RikQ8CET2 560 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Hsf2bpQ9D4G2 338 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Capn2O08529 700 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Gna11P21278 359 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 EspnlQ3UYR4 1005 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 MmeQ61391 750 aa11.12□□□□□ -0.63
Ldlr-201ENSMUST00000034713 Kif1bpQ6ZPU9 617 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms