RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ddr1Q03146 911 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Skap2Q3UND0 358 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ggt6Q6PDE7 497 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Hps6Q8BLY7 805 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rps6ka3P18654 740 aaKnown RBP13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Pde3bQ61409 1100 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 EsrrbQ61539 433 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Golim4Q8BXA1 655 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Iws1Q8C1D8 766 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Prpf6Q91YR7 941 aaKnown RBP13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Tubb4aQ9D6F9 444 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Pus3Q9JI38 481 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Hip1rQ9JKY5 1068 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ak2Q9WTP6 239 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Wnk3Q80XP9 1757 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Mex3cQ05A36 652 aaKnown RBP13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ric8aQ3TIR3 530 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Agtpbp1Q641K1 1218 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ccdc93Q7TQK5 629 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cd209bQ8CJ91 325 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ltb4r2Q9JJL9 360 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ugt1a5B2RT14 529 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Anxa1P10107 346 aaKnown RBP13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 IntuQ059U7 942 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Clip2Q9Z0H8 1047 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Myo1fP70248 1099 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Sorbs1Q62417 1290 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rbbp5Q8BX09 538 aaKnown RBP13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Dnajc28Q8VCE1 385 aa13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Kiaa0232Q80U59 1396 aaKnown RBP13.03□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Zfp142G5E869 1843 aa13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cyb5rlB1AS42 316 aa13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Specc1lQ2KN98 1118 aaKnown RBP13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Lamb3Q61087 1168 aa13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Snd1Q78PY7 910 aaKnown RBP13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Fam193aQ8CGI1 1231 aaKnown RBP13.02□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Sult6b1P0CC03 303 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Rnf20Q5DTM8 973 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gm12185Q5NCB2 835 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Dpf2Q61103 391 aaKnown RBP13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Lmbrd2Q8C561 694 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ankrd49Q8VE42 238 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Entpd5Q9WUZ9 427 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gm15262A0A140LIQ5 728 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Sec24bQ80ZX0 1251 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Trim52Q8CDV4 233 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Srgap1Q91Z69 1062 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ndufab1Q9CR21 156 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Bloc1s2Q9CWG9 143 aa13.02□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Col4a1P02463 1669 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ltbp4Q8K4G1 1666 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Dnajc21E9Q8D0 531 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Usp5P56399 858 aaKnown RBP13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Csrnp1P59054 583 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 A1cfQ5YD48 595 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Sdad1Q80UZ2 687 aaKnown RBP13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Msantd4Q91YU3 345 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Atp8b3Q6UQ17 1335 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Prl3d3A0A0M6L0J6 224 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 LtkP08923 888 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gbp4Q61107 620 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ehd2Q8BH64 543 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 AopepQ8BXQ6 817 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ppfibp1Q8C8U0 969 aaKnown RBP13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Psmd2Q8VDM4 908 aa13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ncoa5Q91W39 579 aaKnown RBP13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Orc1Q9Z1N2 840 aaKnown RBP13.01□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Taf4bG5E8Z2 855 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 NpeppsQ11011 920 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eif3j1Q3UGC7 261 aaKnown RBP13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Sco1Q5SUC9 284 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eif3j2Q66JS6 263 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 LgsnQ8CIX8 563 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gtpbp10Q8K013 366 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pde3aQ9Z0X4 1141 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pla2g4aP47713 748 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Rrp1P56183 494 aaKnown RBP13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ppp1r1bQ60829 194 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Zcwpw1Q6IR42 630 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Fam213aQ9CYH2 218 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Knop1Q9Z2Q2 478 aaKnown RBP13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 BcorQ8CGN4 1759 aa13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Nat10Q8K224 1024 aaKnown RBP13□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Fam43bA2AM80 330 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eef2kO08796 724 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Folh1O35409 752 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Kif2bQ8C0N1 668 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Rhot2Q8JZN7 620 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 BaatQ91X34 420 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Trim11Q99PQ2 467 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 RpainQ9CWY9 219 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Abt1Q9QYL7 269 aaKnown RBP12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ccdc181Q80ZU5 509 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ano1Q8BHY3 960 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Fbxo38Q8BMI0 1194 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ccdc80Q8R2G6 949 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Iffo2Q8R2V2 512 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gle1Q8R322 699 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Card14Q99KF0 999 aa12.99□□□□□ -0.33
Sdc1-201ENSMUST00000020911 ZwintQ9CQU5 252 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms