RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 ImmtQ8CAQ8 757 aaKnown RBP11.27□□□□□ -0.61
Nedd1-201ENSMUST00000020163 4930550L24RikQ99PA7 320 aa11.27□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Chmp3Q9CQ10 224 aa11.27□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Sik3Q6P4S6 1311 aa11.27□□□□□ -0.61
Nedd1-201ENSMUST00000020163 FocadA2AKG8 1798 aa11.27□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Nap1l1P28656 391 aaKnown RBP11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Dnm1P39053 867 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 IntuQ059U7 942 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Sco1Q5SUC9 284 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Epn1Q80VP1 575 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Spats2Q8K1N4 545 aaKnown RBP11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 BlmhQ8R016 455 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Krt25Q8VCW2 446 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ccdc47Q9D024 483 aaKnown RBP11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 SelenooQ9DBC0 667 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Nfat5Q9WV30 1534 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Sdc2P43407 202 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Tex11Q14AT2 947 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Gnat3Q3V3I2 354 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Pcdha7Q91Y13 937 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 LratQ9JI60 231 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 MypnQ5DTJ9 1315 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Lmtk3Q5XJV6 1424 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ampd3O08739 766 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Sult6b1P0CC03 303 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Hand2Q61039 217 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Rassf10Q8BL43 508 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Pde5aQ8CG03 865 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ccdc39Q9D5Y1 937 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Polr2dQ9D7M8 142 aaKnown RBP11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Itga2bQ9QUM0 1033 aa11.26□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Prl3d3A0A0M6L0J6 224 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Psmd14O35593 310 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 AppP12023 770 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Gucy2cQ3UWA6 1072 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Serpinb6Q60854 378 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Adck2Q6NSR3 617 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Lrrn2Q6PHP6 730 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Sval3Q76I99 144 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ppp1r37Q8BKR5 712 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Phc3Q8CHP6 981 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Tldc1Q8K0P3 455 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Xrcc4Q924T3 326 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ppil4Q9CXG3 492 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Calr3Q9D9Q6 380 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Cul4bA2A432 970 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Atp6v1aP50516 617 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Slc12a2P55012 1205 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Surf6P70279 355 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Atg9aQ68FE2 551 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ppp4r3bQ922R5 820 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 SetQ9EQU5 289 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 E9QMW4 1145 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Iqsec3Q3TES0 1195 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Znf653Q6YND2 615 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Tmem266Q8BZB3 538 aa11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Pdcd6ipQ9WU78 869 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Uso1Q9Z1Z0 959 aaKnown RBP11.25□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Metap2O08663 478 aaKnown RBP11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Cyp26a1O55127 497 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ddx49Q4FZF3 480 aaKnown RBP11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Zrsr2Q62377 462 aaKnown RBP11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ctdspl2Q8BG15 465 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 AopepQ8BXQ6 817 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Smc2Q8CG48 1191 aaKnown RBP11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Cfap45Q9D9U9 551 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Egfl6Q9JJZ5 550 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Nrxn3Q6P9K9 1571 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Gm10134F6ZQC6 126 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Hap1O35668 628 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Grin1P35438 938 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Mmp14P53690 582 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Tcp11Q01755 566 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Slc30a9Q5IRJ6 567 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Hook2Q7TMK6 716 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Rasal3Q8C2K5 1041 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Lrrc42Q8R2U7 421 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Rab3il1Q8VDV3 383 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Pcdhb22Q91XZ8 794 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Cep83Q9D5R3 692 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Fam217aQ9D9W6 419 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Knop1Q9Z2Q2 478 aaKnown RBP11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Gli3Q61602 1583 aa11.24□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ttll7A4Q9F0 912 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Tpm3-rs7D3Z2H9 248 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 IkbkbO88351 757 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Cplx2P84086 134 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Llgl2Q3TJ91 1027 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 A1cfQ5YD48 595 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Rbm12b2Q66JV4 834 aaKnown RBP11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Papd7Q6PB75 542 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Ppm1eQ80TL0 749 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Bpifb6Q8BU51 449 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Traf3ip3Q8C0G2 513 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Bola3Q8CEI1 110 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Taf6lQ8R2K4 616 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Mfap3Q922T2 349 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Col3a1P08121 1464 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 Zfand4D3Z3C6 739 aa11.23□□□□□ -0.61
Nedd1-201ENSMUST00000020163 PnnO35691 725 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms