RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Fxyd7P59648 80 aa10.85□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 TncQ80YX1 2110 aa10.85□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 NbasE9Q411 2356 aa10.85□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Gm5105Q8C6Y9 112 aa10.85□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Pradc1Q9D9N8 188 aa10.85□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Gm9961Q8BNV2 113 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Tmem14cQ9CQN6 114 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Gm867A0A1W2P7T4 151 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 NrgnP60761 78 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Il1f10Q8R459 152 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Ighv3-1A0A075B5S6 116 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Brd3osA0A1B0GRB6 84 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 March3Q8BRX9 218 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 Golgb1E9PVZ8 3238 aa10.84□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 FancmQ8BGE5 2021 aa10.83□□□□□ -0.67
Pcdha1-202ENSMUST00000193839 P01658 132 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 NdpP48744 131 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P01674 108 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 NpsP0C0P8 89 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv8-4A0A0A6YW26 117 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P01643 108 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Iglv1A0A075B663 117 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm9573F7C950 1606 aa10.83□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Mlst8Q9DCJ1 326 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv5-9-1A0A0A6YVS4 126 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 KprpB2RUR4 657 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Hrct1Q9D6B9 109 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 HampQ9EQ21 83 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Dopey1Q8BL99 2399 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P01811 117 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Nbl1Q61477 178 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm17455G3UW87 128 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P01793 123 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Defa7P50705 93 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Usf3B2RUQ2 2221 aa10.82□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 9230109A22RikQ8BHE6 111 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 ColqO35348 457 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Foxi1Q922I5 372 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Spg11Q3UHA3 2430 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm16381A0A1Y7VKT9 73 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Cysrt1Q9D1E4 142 aa10.81□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm7849D3YX03 116 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P04944 107 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Olfr312Q7TRZ9 308 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Mustn1Q99JI1 82 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Xcl1P47993 114 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Il22ra2Q80XF5 230 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Zfyve26Q5DU37 2529 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Sdhaf1Q3U276 118 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Spata25Q9DA57 226 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm26558Q8BLW8 286 aa10.8□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv8-8A0A0A6YXQ0 119 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Col8a2P25318 699 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 MalO09198 153 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Rpl36aP83882 106 aaKnown RBP10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 P0C913 63 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Adamts20P59511 1906 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm5089A1L3C8 106 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 CrygbP04344 175 aa10.79□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv6-7A0A0A6YWU3 119 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Atp6v0e2Q91XE7 81 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Tcf24V9GWT9 166 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm26727M0QWT1 121 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Mapk1ip1lQ8BH93 242 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ifitm1Q9D103 106 aa10.78□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv2-6A0A075B6A7 116 aa10.77□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Gm15557A6PWY0 234 aa10.77□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Defa25Q5G864 92 aa10.77□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Lyg1Q9D7Q0 197 aa10.77□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Med13lQ6JPI3 2207 aa10.77□□□□□ -0.68
Pcdha1-202ENSMUST00000193839 Ighv1-64A0A075B5X3 117 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Rasl10aQ8K5A4 203 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Hoxb4P10284 250 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Lmo4P61969 165 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Zfand3Q497H0 227 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Tcl1b4P56844 120 aa10.77□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ighv3-8A0A075B5T0 131 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Defa28D3Z1V9 94 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 PkigO70139 76 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ighv1-52A0A0A6YXC3 117 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ighv1-77A0A0G2JGS9 117 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Trav3-4A0A075B654 114 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm9925F6T2U3 160 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm9913Q8BQQ2 135 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm9958Q8C9U4 106 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Rpl35aO55142 110 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Lyzl4Q9D925 145 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 F5O88783 2183 aa10.76□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 4930447F04RikA2AFR2 126 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm26602M0QWA4 95 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Tln1P26039 2541 aaKnown RBP10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01728 117 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01791 123 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm10604Q3V0X7 143 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Olfr313Q5NC55 308 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Trbv14A0A140T8L9 115 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Klk1b4P00757 256 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 SpinklQ8CEK3 90 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 UrahQ9CRB3 118 aa10.75□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ankrd39Q9D2X0 183 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms