RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 GlrxQ9QUH0 107 aa12.71□□□□□ -0.37
Pcdh1-203ENSMUST00000160721 Sdhaf1Q3U276 118 aa12.71□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Zic4Q61467 341 aa12.71□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Igkv3-1A0A075B5P1 119 aa12.71□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Trav14d-3-dv8A0A075B619 120 aa12.71□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm9913Q8BQQ2 135 aa12.71□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 P01791 123 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm5129F6YHA9 99 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 LoxP28301 411 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm9747Q810H1 104 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 B230307C23RikQ8BLB2 64 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Dpm3Q9D1Q4 92 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 P01794 123 aa12.7□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gata4Q08369 441 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Fancd2osQ9D4K4 178 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Bex1Q9R224 128 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Ndufa4Q62425 82 aaKnown RBP12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Lhfpl1Q80SV1 220 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Dkk4Q8VEJ3 221 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Ighv8-8A0A0A6YXQ0 119 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Lect2O88803 151 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Loxl1P97873 607 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Foxi1Q922I5 372 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Tomm6Q9CQN3 74 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm15294V9GXA7 121 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Pip4p1Q3TWL2 284 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Tal2Q62282 108 aa12.69□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Taf15Q8BQ46 557 aaKnown RBP12.68□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Dido1Q8C9B9 2256 aaKnown RBP12.68□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Igkv4-72A0A0B4J1I4 117 aa12.68□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Olfr312Q7TRZ9 308 aa12.68□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 A530064D06RikQ8BNV8 229 aa12.68□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 MsmpB1AWI6 139 aa12.67□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Igkv4-54A0A0G2JES9 117 aa12.67□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Igkv2-137A0A0B4J1H6 120 aa12.67□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Ang5Q5GAN1 145 aa12.67□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Reg3dQ9QUS9 175 aa12.67□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Il22ra2Q80XF5 230 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Spink10Q8CAC8 162 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Trav12-3A0A075B648 115 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Igkv6-13A0A0G2JGY3 119 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Foxf1Q61080 378 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Mustn1Q99JI1 82 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Them7Q9DCP4 223 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Chchd5Q9CQP3 110 aa12.66□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm11733Q8BQP1 125 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Spink12Q9D256 87 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Hrct1Q9D6B9 109 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Crybg1A0A0G2JG52 2065 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Lrrk2Q5S006 2527 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 CtsbP10605 339 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Tnfrsf13bQ9ET35 249 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Gm7257D3YX25 99 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Minos1Q7TNS2 76 aa12.65□□□□□ -0.38
Pcdh1-203ENSMUST00000160721 Ighv1-19A0A0A6YWX0 117 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Trav14d-1A0A075B6B1 121 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Wisp3D3Z5L9 354 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm21994F6T2D2 329 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Rasl10aQ8K5A4 203 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Smim26Q3V460 107 aa12.64□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Q8R092 253 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Ubl5Q9EPV8 73 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Ighv1-39A0A075B5V5 117 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm815Q3UWS2 115 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 F5O88783 2183 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Igkv8-16A0A0G2JDG9 121 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Znrf2Q71FD5 238 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Tnfrsf23Q9ER63 176 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Trav9d-4A0A0G2JG37 103 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 ApomQ9Z1R3 190 aa12.63□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Ighv1-62-2A0A0A6YXZ4 119 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 NpbQ8K4P1 119 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Cysrt1Q9D1E4 142 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Igkv4-69A0A0B4J1I6 116 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Ccl25O35903 144 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 4930447F04RikA2AFR2 126 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Spata25Q9DA57 226 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Rnf114Q9ET26 229 aa12.62□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Rpl32P62911 135 aaKnown RBP12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Igkv3-9A0A140T8P4 119 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Prp2P05143 317 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Rmi2Q3UPE3 149 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Sdk1Q3UH53 2193 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Col24a1Q30D77 1733 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Trav6n-6A0A075B6B2 114 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 P01738 130 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 4930415O20RikQ8CDT5 131 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Spag11Q8K4N2 71 aa12.61□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Zfp951A0A087WRH0 451 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm20726G3UX18 150 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Olfr313Q5NC55 308 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Igkv4-79A0A075B5L8 119 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Fam110aQ8R184 296 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Synj2bpQ9D6K5 145 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Nsun4C4P6S0 806 aaKnown RBP12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Tmem263Q9DAM7 115 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm8251F6VUT6 1994 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Notch4P31695 1964 aa12.6□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Igkv4-78A0A0A6YYE5 119 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm17677B3GLJ5 116 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 128.8 ms