RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Svs5P30933 122 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Srsf1Q6PDM2 248 aaKnown RBP6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 CstadQ9D245 104 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trav7n-5A0A075B604 112 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 S100a4P07091 101 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Col8a2P25318 699 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 4933414I15RikQ9D4D5 133 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Usp9yF8VPU6 2556 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ighv1-20A0A0A6YX66 117 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Nsun4C4P6S0 806 aaKnown RBP6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 NdpP48744 131 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm1968Q3T9I3 115 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Khdc1cQ4KL78 166 aa6.96□□□□□ -1.3
Col28a1-201ENSMUST00000115537 IgipA0A1B0GR74 53 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Brd3osA0A1B0GRB6 84 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm5294J3QP53 216 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Dkk1O54908 272 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Atp6v0e2Q91XE7 81 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Parm1Q923D3 296 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Trav9d-1A0A075B699 112 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Tctex1d4Q8CDY7 219 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Atp5lQ9CPQ8 103 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gemin7Q9CWY4 129 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Shisa9Q9CZN4 424 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Lyg1Q9D7Q0 197 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Igkv4-80A0A075B5L7 116 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 AdipoqQ60994 247 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Hspe1Q64433 102 aaKnown RBP6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Odf3l1Q810P2 275 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm14137Q8CE97 175 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ifi27l2aQ8R412 90 aa6.95□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm933J3QPC1 141 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Cd24P24807 76 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Loxl1P97873 607 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Cox6cQ9CPQ1 76 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 SNORCQ9CXL7 121 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 IappP12968 93 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Tcl1b4P56844 120 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Foxi1Q922I5 372 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 EppinQ9DA01 134 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ccl24Q9JKC0 119 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 FryE9Q8I9 3020 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 PtprbB2RU80 1998 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm2174F6ZVF2 133 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 F11rO88792 300 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 CckP09240 115 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 EpopQ7TNS8 369 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Dscaml1Q4VA61 2053 aa6.94□□□□□ -1.3
Col28a1-201ENSMUST00000115537 KprpB2RUR4 657 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gsx1P31315 261 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Trav7d-3Q5R1I1 112 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 FrylF8VQ05 3007 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 FasnP19096 2504 aaKnown RBP6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Lgals6O54891 301 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 BC106179Q8C9L1 186 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Lrp4Q8VI56 1905 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Wt1P22561 449 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Trav7-5A0A0G2JFX6 112 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Defa4P28311 92 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Rpl32P62911 135 aaKnown RBP6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 7420426K07RikQ3UX66 186 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm10118Q8C8J5 116 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Pradc1Q9D9N8 188 aa6.93□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Vsig4F6TUL9 280 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Defa7P50705 93 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Mustn1Q99JI1 82 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Timm23Q9WTQ8 209 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 VcanQ62059 3357 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Nxph4G3X9N5 304 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ndufa1O35683 70 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Tspan13Q9D8C2 204 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ighv8-12A0A0G2JDE1 119 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Umad1E0CX23 159 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm17727E9Q4V7 109 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Crip1P63254 77 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Vwc2lQ505H4 222 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 March3Q8BRX9 218 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 NpbQ8K4P1 119 aa6.92□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Prima1Q810F0 153 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm9913Q8BQQ2 135 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Znf672Q99LH4 468 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ormdl2Q9CQZ0 153 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm35549A0A0N4SUS7 141 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm9925F6T2U3 160 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Defa25Q5G864 92 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm17334Q8C6U3 126 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Mfap4Q9D1H9 257 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 P0C1Z5 52 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Fam222aQ6PGH4 453 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Lypd1Q8BLC3 141 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ndufa3Q9CQ91 84 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Dpm2Q9Z324 84 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm26938S4R185 226 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm9573F7C950 1606 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Wdfy4E9Q2M9 3149 aa6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ranbp2Q9ERU9 3053 aaKnown RBP6.91□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Ighv5-6A0A075B5Q0 117 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm6793B2RXM2 351 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 CrygbP04344 175 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 TtrP07309 147 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms