RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 UrahQ9CRB3 118 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Bub3Q9WVA3 326 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Wipf2Q6PEV3 440 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Morn3Q8C5T4 241 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 NmbQ9CR53 121 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Col6a4A2AX52 2309 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Xcl1P47993 114 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Cysrt1Q9D1E4 142 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 1700012A03RikQ9DAF1 130 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Mapk1ip1Q9D7G9 263 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 LtbP41155 306 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 COA4Q8BT51 87 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Crybg1A0A0G2JG52 2065 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 OdaphJ3QNT8 126 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 PrcdQ00LT2 53 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Plxna3P70208 1872 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ptprz1B9EKR1 2312 aa11.42□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Plxnb1Q8CJH3 2119 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm10881P01642 115 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 C730034F03RikQ8BGL5 111 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Igkv8-26A0A075B5N5 123 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Q08AU9 97 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Dmrtc1c1Q9D410 238 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Morn5Q9DAI9 170 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Foxf1Q61080 378 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ndufa4Q62425 82 aaKnown RBP11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Cox11Q6P8I6 275 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Mpv17l2Q8VIK2 200 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Rnf138Q9CQE0 245 aaKnown RBP11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Rspo1Q9Z132 265 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ighv6-7A0A0A6YWU3 119 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Trbv13-1A0A0B4J1P8 112 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm15128A2ADW8 449 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Luzp4B1AV09 449 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm15127B1AVZ5 449 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm15107B1B0X0 449 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm15085Q62012 449 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Timm17aQ9Z0V8 171 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm45861A0A1B0GRY3 1923 aa11.41□□□□□ -0.58
Shroom3-202ENSMUST00000113054 A730015C16RikQ8C992 119 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 4930415O20RikQ8CDT5 131 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ndufa1O35683 70 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Nbl1Q61477 178 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Cfap126Q6P8X9 189 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 LenepQ9WVB6 61 aa11.4□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Tcl1b2P56841 117 aa11.4□□□□□ -0.59
Shroom3-202ENSMUST00000113054 B230307C23RikQ8BLB2 64 aa11.4□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ucn2Q99ML8 113 aa11.4□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Trbv14A0A140T8L9 115 aa11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Olfr312Q7TRZ9 308 aa11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Pet100P0DJE0 76 aa11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 MifP34884 115 aaKnown RBP11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Lyrm9Q3UN90 78 aa11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Cd33Q63994 403 aa11.39□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm10251J3QPM5 127 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm2916Q9D9B9 127 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm4861Q8C5A4 106 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Nckap5E9QAE1 1909 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Fam24aQ8CF27 98 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Trav14n-2A0A0G2JDF5 121 aa11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 AtrxQ61687 2476 aaKnown RBP11.38□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ighv3-1A0A075B5S6 116 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Fstl3Q9EQC7 256 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ighv1-23A0A0A6YVW3 117 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ighv1-52A0A0A6YXC3 117 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Higd2aQ9CQJ1 106 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Trav14-2A0A075B694 121 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Klk4Q9Z0M1 255 aa11.37□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Wfdc15bQ9JHY4 80 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ighv8-8A0A0A6YXQ0 119 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Samd5Q3V1H9 173 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Plxna4Q80UG2 1893 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 P01745 121 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Zfp36l1P23950 338 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ndufa12Q7TMF3 145 aaKnown RBP11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 9430097D07RikQ8BS47 195 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Fancd2osQ9D4K4 178 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 MylkQ6PDN3 1941 aaKnown RBP11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Olfr313Q5NC55 308 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Il22ra2Q80XF5 230 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ubl5Q9EPV8 73 aa11.36□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Igkv1-88A0A140T8N1 120 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Sdk2Q6V4S5 2176 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Zfp951A0A087WRH0 451 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 P01750 117 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Eml5Q8BQM8 1977 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ebi3O35228 228 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gtsf1Q9DAN6 167 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Trav13d-4A0A0G2JFX3 110 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm20499D3Z4G5 72 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Tnfrsf26P83626 204 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Atp6v0e2Q91XE7 81 aa11.35□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Igkv3-5A0A140T8M6 119 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Mustn1Q99JI1 82 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Ube2v1Q9CZY3 147 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm5294J3QP53 216 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Cfap46E9Q2C0 2641 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Gm20517G3UVU6 152 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 Mtatp8P03930 67 aa11.34□□□□□ -0.59
Shroom3-202ENSMUST00000113054 March3Q8BRX9 218 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 96.4 ms