RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Col4a4Q9QZR9 1682 aa7.43□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm29423A0A087WRM1 55 aa7.43□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Ndufa4Q62425 82 aaKnown RBP7.43□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 EnsaP60840 121 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rnf182Q8C432 247 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rnase2aQ8K196 155 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Pygo1Q9D0P5 417 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Hcfc1Q61191 2045 aaKnown RBP7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 IappP12968 93 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Q5BN45 167 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Dand5Q76LW6 185 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Zfp951A0A087WRH0 451 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Trav4-3A0A0B4J1K1 110 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Col9a3A2ACT7 680 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Wdr86D3Z757 380 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm5093E9PZB3 174 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 MifP34884 115 aaKnown RBP7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rpl18aP62717 176 aaKnown RBP7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 4930442H23RikQ9D5G7 103 aa7.42□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Malrd1A2AJX4 2123 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Heatr1G3X9B1 2143 aaKnown RBP7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm12888Q3UW77 119 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Serp2Q6TAW2 65 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Klk15Q8CGR4 254 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Timm8a1Q9WVA2 97 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 HttP42859 3119 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Dscaml1Q4VA61 2053 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Ighv8-11A0A075B5X4 119 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Trav14d-3-dv8A0A075B619 120 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rpl35aO55142 110 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Wt1P22561 449 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Sumo2P61957 95 aaKnown RBP7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Wipf1Q8K1I7 493 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 F5O88783 2183 aa7.41□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rpl36-ps4A0A140T8U4 117 aa7.4□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm15821A6X8J8 139 aa7.4□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Cxcl10P17515 98 aa7.4□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Prr30Q9D9B7 401 aa7.4□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Trav9d-1A0A075B699 112 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Lyz1P17897 148 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ctsll3Q3ULP7 331 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Olfr1242Q8VGM6 306 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Crlf1Q9JM58 425 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Pi4kaE9Q3L2 2105 aa7.4□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ins1P01325 108 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Rpl27aP14115 148 aaKnown RBP7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ube2e1P52482 193 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Taf15Q8BQ46 557 aaKnown RBP7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Mrpl36Q99N90 102 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Abca7Q91V24 2159 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Trav19A0A0B4J1K4 119 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm5629P06327 117 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Vpreb1P13372 142 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 TeppQ6IMH0 216 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Q9CX25 107 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Frem2Q6NVD0 3160 aa7.39□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Shank1D3YZU1 2167 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 P01727 129 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Q08AU9 97 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 AI854703Q8BIN3 203 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Spry2Q9QXV8 315 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Asxl3Q8C4A5 2259 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ighv7-4A0A0A6YXL5 121 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Dlx1Q64317 255 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Pear1Q8VIK5 1034 aa7.38□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ighv13-2A0A0A6YWN3 119 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Igkv2-137A0A0B4J1H6 120 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm20878L7N244 103 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Fhl2O70433 279 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Pou2af1Q64693 256 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ighv12-3A0A075B5T1 117 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gp9O88186 177 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ly6gP35461 111 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm16223Q8CBM3 117 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Mki67E9PVX6 3177 aaKnown RBP7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Tnfaip6O08859 275 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Hbb-b2P02089 147 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Prss38Q3UKY7 322 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Defa23Q5G866 93 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Tmem14cQ9CQN6 114 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 4931428L18RikQ9D4S9 127 aa7.37□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Brca2P97929 3329 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Vps13aQ5H8C4 3166 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm13090A2A899 111 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ly6c1P0CW02 131 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 GhrhP16043 103 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ss18l1Q8BW22 402 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Defa21Q8C1P2 93 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm10118Q8C8J5 116 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ly6g6dQ9Z1Q3 135 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Tmem243B2RVB9 118 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ccl26F8VQM2 93 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Rnf5O35445 180 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Lect2O88803 151 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 NgfP01139 241 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 GrnP28798 589 aaKnown RBP7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 BC025920Q3US60 128 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Bean1Q9EQG5 255 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Defb3Q9WTL0 63 aa7.36□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ahctf1Q8CJF7 2243 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms