RNA–Protein interactions for RNA: ENSMUST00000025667.12

Rtn3-201, Transcript of Reticulon-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn3, Length 2,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-201ENSMUST00000025667 4930432M17RikQ3V0W9 174 aa12.3□□□□□ -0.44
Rtn3-201ENSMUST00000025667 TtrP07309 147 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Ccl11P48298 97 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Q08AU9 97 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Arpc1aQ9R0Q6 370 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Timm23Q9WTQ8 209 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Trav4n-4A0A075B615 110 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Egr2P08152 470 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Ss18Q62280 418 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm9922Q8C3P1 144 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Abca1P41233 2261 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm20726G3UX18 150 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Tex26Q0VB26 296 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm10767Q3TQP0 103 aa12.29□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm12888Q3UW77 119 aa12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Rnf182Q8C432 247 aa12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Ovol2Q8CIV7 274 aa12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Vmn1r62Q8R2C0 300 aa12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Map1bP14873 2464 aaKnown RBP12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm6040Q4QY32 63 aa12.28□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Trav4d-3A0A075B625 110 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 9830107B12RikD3Z5D6 160 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Gm933J3QPC1 141 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Rpl27aP14115 148 aaKnown RBP12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Foxi2Q3I5G5 311 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Ndufa4l2Q4FZG9 87 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 S100a15aQ6S5I3 108 aa12.27□□□□□ -0.44
Rtn3-201ENSMUST00000025667 Shank1D3YZU1 2167 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Trav7-6A0A075B640 112 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 C920008G01RikA0A0B4J1N1 112 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Tnfaip6O08859 275 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 D130052B06RikQ3UW13 202 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm9949Q8C9F4 104 aa12.27□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Rpl32-psP17932 135 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ighv3-6P18531 116 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Pglyrp4Q0VB07 374 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Lypd1Q8BLC3 141 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 SpenQ62504 3644 aaKnown RBP12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gsx1P31315 261 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Fxyd3Q61835 88 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Q9CQ90 155 aa12.26□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Lbhd2G3UW55 114 aa12.25□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Dmrt3Q80WT2 476 aa12.25□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm16223Q8CBM3 117 aa12.25□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm12830F6XVH0 157 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Zfp248Q640N4 576 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ifitm10Q8BR26 201 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm26938S4R185 226 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 CrebbpP45481 2441 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ovol3D3YYM0 189 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Asphd1Q2TA57 360 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Prrc2aQ7TSC1 2158 aaKnown RBP12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Casp6O08738 276 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm17334Q8C6U3 126 aa12.24□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm884A2A9H6 3643 aa12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Prss38Q3UKY7 322 aa12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ccl8Q9Z121 97 aa12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Cnot1Q6ZQ08 2375 aaKnown RBP12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Rps28P62858 69 aaKnown RBP12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Zc2hc1bQ9D534 172 aa12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Esm1Q9QYY7 184 aa12.23□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Gm3285A0A1W2P7U0 201 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ly6c1P0CW02 131 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ormdl2Q9CQZ0 153 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Ighv5-6A0A075B5Q0 117 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Igkv2-137A0A0B4J1H6 120 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 P04944 107 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Khdc1cQ4KL78 166 aa12.22□□□□□ -0.45
Rtn3-201ENSMUST00000025667 P84751 237 aa12.21□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Srsf2Q62093 221 aaKnown RBP12.21□□□□□ -0.45
Rtn3-201ENSMUST00000025667 Tmem95P0DJF3 176 aa12.21□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Pde6hP61249 83 aa12.21□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Gatd1Q8BFQ8 220 aa12.21□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Ubald2Q8BQH4 164 aa12.21□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Gvin1Q80SU7 2427 aa12.2□□□□□ -0.46
Rtn3-201ENSMUST00000025667 RflnaQ7TS73 204 aa12.2□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Dynlrb1P62627 96 aa12.2□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Tmem89Q9DA04 169 aa12.2□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Olfr313Q5NC55 308 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Fhl4Q8CDC8 279 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Csmd1Q923L3 3564 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 NacaP70670 2187 aaKnown RBP12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Wipf1Q8K1I7 493 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Bod1lE9Q6J5 3032 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Kmt2bO08550 2713 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Samd13D3YUG0 102 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 PmvkQ9D1G2 192 aa12.19□□□□□ -0.46
Rtn3-201ENSMUST00000025667 4930518I15RikQ3V2W7 57 aa12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Gm29423A0A087WRM1 55 aa12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Ighv1-23A0A0A6YVW3 117 aa12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Ndufa4Q62425 82 aaKnown RBP12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Rps21Q9CQR2 83 aaKnown RBP12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 EppinQ9DA01 134 aa12.18□□□□□ -0.46
Rtn3-201ENSMUST00000025667 3110021N24RikJ3QMN2 152 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Pip4p1Q3TWL2 284 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Gm5105Q8C6Y9 112 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Fancd2osQ9D4K4 178 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 KalrnA2CG49 2964 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Ighv7-3A0A075B5R2 120 aa12.17□□□□□ -0.46
Rtn3-201ENSMUST00000025667 Gm35549A0A0N4SUS7 141 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 68.6 ms