RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
RBM39-245ENST00000639702 MT1AP04731 61 aa3.62□□□□□ -1.83
RBM39-245ENST00000639702 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
RBM39-245ENST00000639702 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
RBM39-245ENST00000639702 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
RBM39-245ENST00000639702 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
RBM39-245ENST00000639702 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
RBM39-245ENST00000639702 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
RBM39-245ENST00000639702 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
RBM39-245ENST00000639702 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
RBM39-245ENST00000639702 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
RBM39-245ENST00000639702 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
RBM39-245ENST00000639702 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
RBM39-245ENST00000639702 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
RBM39-245ENST00000639702 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
RBM39-245ENST00000639702 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.85
RBM39-245ENST00000639702 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
RBM39-245ENST00000639702 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
RBM39-245ENST00000639702 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
RBM39-245ENST00000639702 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
RBM39-245ENST00000639702 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
RBM39-245ENST00000639702 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
RBM39-245ENST00000639702 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
RBM39-245ENST00000639702 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
RBM39-245ENST00000639702 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
RBM39-245ENST00000639702 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
RBM39-245ENST00000639702 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.89
RBM39-245ENST00000639702 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
RBM39-245ENST00000639702 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
RBM39-245ENST00000639702 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
RBM39-245ENST00000639702 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
RBM39-245ENST00000639702 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
RBM39-245ENST00000639702 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
RBM39-245ENST00000639702 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
RBM39-245ENST00000639702 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
RBM39-245ENST00000639702 UBR4Q5T4S7 5183 aa3.01□□□□□ -1.93
RBM39-245ENST00000639702 MUC2Q02817 5179 aa2.96□□□□□ -1.94
RBM39-245ENST00000639702 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
RBM39-245ENST00000639702 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
RBM39-245ENST00000639702 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
RBM39-245ENST00000639702 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
RBM39-245ENST00000639702 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
RBM39-245ENST00000639702 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
RBM39-245ENST00000639702 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
RBM39-245ENST00000639702 NEBP20929 6669 aa2.65□□□□□ -1.98
RBM39-245ENST00000639702 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
RBM39-245ENST00000639702 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
RBM39-245ENST00000639702 USH2AO75445 5202 aa2.6□□□□□ -1.99
RBM39-245ENST00000639702 SSPOA2VEC9 5147 aa2.59□□□□□ -2
RBM39-245ENST00000639702 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
RBM39-245ENST00000639702 KMT2DO14686 5537 aa2.46□□□□□ -2.02
RBM39-245ENST00000639702 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
RBM39-245ENST00000639702 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
RBM39-245ENST00000639702 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
RBM39-245ENST00000639702 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
RBM39-245ENST00000639702 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
RBM39-245ENST00000639702 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
RBM39-245ENST00000639702 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
RBM39-245ENST00000639702 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
RBM39-245ENST00000639702 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
RBM39-245ENST00000639702 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
RBM39-245ENST00000639702 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
RBM39-245ENST00000639702 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
RBM39-245ENST00000639702 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
RBM39-245ENST00000639702 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
RBM39-245ENST00000639702 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
RBM39-245ENST00000639702 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
RBM39-245ENST00000639702 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
RBM39-245ENST00000639702 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
RBM39-245ENST00000639702 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
RBM39-245ENST00000639702 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
RBM39-245ENST00000639702 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
RBM39-245ENST00000639702 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
RBM39-245ENST00000639702 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
RBM39-245ENST00000639702 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
RBM39-245ENST00000639702 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
RBM39-245ENST00000639702 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
RBM39-245ENST00000639702 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 23.7 ms