RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
HNRNPU-219ENST00000639628 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
HNRNPU-219ENST00000639628 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
HNRNPU-219ENST00000639628 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
HNRNPU-219ENST00000639628 MT1MQ8N339 61 aa2.74□□□□□ -1.97
HNRNPU-219ENST00000639628 SPRR2EP22531 72 aa2.73□□□□□ -1.97
HNRNPU-219ENST00000639628 SPRR2BP35325 72 aa2.73□□□□□ -1.97
HNRNPU-219ENST00000639628 SPRR2AP35326 72 aa2.73□□□□□ -1.97
HNRNPU-219ENST00000639628 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
HNRNPU-219ENST00000639628 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
HNRNPU-219ENST00000639628 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
HNRNPU-219ENST00000639628 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
HNRNPU-219ENST00000639628 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
HNRNPU-219ENST00000639628 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
HNRNPU-219ENST00000639628 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
HNRNPU-219ENST00000639628 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.99
HNRNPU-219ENST00000639628 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
HNRNPU-219ENST00000639628 SPRR2DP22532 72 aa2.63□□□□□ -1.99
HNRNPU-219ENST00000639628 KRTAP9-6A0A140TA67 174 aa2.63□□□□□ -1.99
HNRNPU-219ENST00000639628 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
HNRNPU-219ENST00000639628 USH2AO75445 5202 aa2.58□□□□□ -2
HNRNPU-219ENST00000639628 MT1AP04731 61 aa2.53□□□□□ -2
HNRNPU-219ENST00000639628 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2.01
HNRNPU-219ENST00000639628 KMT2DO14686 5537 aa2.52□□□□□ -2.01
HNRNPU-219ENST00000639628 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
HNRNPU-219ENST00000639628 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
HNRNPU-219ENST00000639628 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
HNRNPU-219ENST00000639628 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
HNRNPU-219ENST00000639628 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
HNRNPU-219ENST00000639628 PRM1P04553 51 aa2.45□□□□□ -2.02
HNRNPU-219ENST00000639628 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
HNRNPU-219ENST00000639628 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
HNRNPU-219ENST00000639628 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
HNRNPU-219ENST00000639628 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
HNRNPU-219ENST00000639628 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
HNRNPU-219ENST00000639628 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
HNRNPU-219ENST00000639628 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
HNRNPU-219ENST00000639628 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
HNRNPU-219ENST00000639628 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
HNRNPU-219ENST00000639628 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
HNRNPU-219ENST00000639628 MT4P47944 62 aa2.3□□□□□ -2.04
HNRNPU-219ENST00000639628 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
HNRNPU-219ENST00000639628 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
HNRNPU-219ENST00000639628 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
HNRNPU-219ENST00000639628 LCE4AQ5TA78 99 aa2.25□□□□□ -2.05
HNRNPU-219ENST00000639628 KRTAP9-7A8MTY7 169 aa2.24□□□□□ -2.05
HNRNPU-219ENST00000639628 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
HNRNPU-219ENST00000639628 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
HNRNPU-219ENST00000639628 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
HNRNPU-219ENST00000639628 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
HNRNPU-219ENST00000639628 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
HNRNPU-219ENST00000639628 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
HNRNPU-219ENST00000639628 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
HNRNPU-219ENST00000639628 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
HNRNPU-219ENST00000639628 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
HNRNPU-219ENST00000639628 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
HNRNPU-219ENST00000639628 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
HNRNPU-219ENST00000639628 NEBP20929 6669 aa1.94□□□□□ -2.1
HNRNPU-219ENST00000639628 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
HNRNPU-219ENST00000639628 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
HNRNPU-219ENST00000639628 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
HNRNPU-219ENST00000639628 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
HNRNPU-219ENST00000639628 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
HNRNPU-219ENST00000639628 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
HNRNPU-219ENST00000639628 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
HNRNPU-219ENST00000639628 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
HNRNPU-219ENST00000639628 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
HNRNPU-219ENST00000639628 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
HNRNPU-219ENST00000639628 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
HNRNPU-219ENST00000639628 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
HNRNPU-219ENST00000639628 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
HNRNPU-219ENST00000639628 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
HNRNPU-219ENST00000639628 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
HNRNPU-219ENST00000639628 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HNRNPU-219ENST00000639628 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
HNRNPU-219ENST00000639628 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
HNRNPU-219ENST00000639628 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 99 ms