RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
KCNMA1-261ENST00000639486 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
KCNMA1-261ENST00000639486 RYR3Q15413 4870 aa4.53□□□□□ -1.68
KCNMA1-261ENST00000639486 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
KCNMA1-261ENST00000639486 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
KCNMA1-261ENST00000639486 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
KCNMA1-261ENST00000639486 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
KCNMA1-261ENST00000639486 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
KCNMA1-261ENST00000639486 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
KCNMA1-261ENST00000639486 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
KCNMA1-261ENST00000639486 HERC1Q15751 4861 aa4.26□□□□□ -1.73
KCNMA1-261ENST00000639486 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
KCNMA1-261ENST00000639486 RYR2Q92736 4967 aa4.23□□□□□ -1.73
KCNMA1-261ENST00000639486 BIRC6Q9NR09 4857 aa4.2□□□□□ -1.74
KCNMA1-261ENST00000639486 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
KCNMA1-261ENST00000639486 HYDINQ4G0P3 5121 aa4.16□□□□□ -1.74
KCNMA1-261ENST00000639486 LCE1CQ5T751 118 aa4.15□□□□□ -1.74
KCNMA1-261ENST00000639486 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
KCNMA1-261ENST00000639486 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
KCNMA1-261ENST00000639486 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
KCNMA1-261ENST00000639486 PCLOQ9Y6V0 5065 aa4.13□□□□□ -1.75
KCNMA1-261ENST00000639486 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
KCNMA1-261ENST00000639486 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
KCNMA1-261ENST00000639486 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
KCNMA1-261ENST00000639486 HERC2O95714 4834 aa4□□□□□ -1.77
KCNMA1-261ENST00000639486 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
KCNMA1-261ENST00000639486 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
KCNMA1-261ENST00000639486 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
KCNMA1-261ENST00000639486 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
KCNMA1-261ENST00000639486 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
KCNMA1-261ENST00000639486 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
KCNMA1-261ENST00000639486 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
KCNMA1-261ENST00000639486 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
KCNMA1-261ENST00000639486 RNF213Q63HN8 5207 aa3.59□□□□□ -1.83
KCNMA1-261ENST00000639486 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
KCNMA1-261ENST00000639486 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
KCNMA1-261ENST00000639486 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
KCNMA1-261ENST00000639486 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
KCNMA1-261ENST00000639486 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
KCNMA1-261ENST00000639486 KMT2DO14686 5537 aa3.47□□□□□ -1.85
KCNMA1-261ENST00000639486 MUC2Q02817 5179 aa3.47□□□□□ -1.85
KCNMA1-261ENST00000639486 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
KCNMA1-261ENST00000639486 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
KCNMA1-261ENST00000639486 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
KCNMA1-261ENST00000639486 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
KCNMA1-261ENST00000639486 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
KCNMA1-261ENST00000639486 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
KCNMA1-261ENST00000639486 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
KCNMA1-261ENST00000639486 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
KCNMA1-261ENST00000639486 USH2AO75445 5202 aa3.08□□□□□ -1.92
KCNMA1-261ENST00000639486 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
KCNMA1-261ENST00000639486 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
KCNMA1-261ENST00000639486 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
KCNMA1-261ENST00000639486 NEBP20929 6669 aa2.88□□□□□ -1.95
KCNMA1-261ENST00000639486 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
KCNMA1-261ENST00000639486 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
KCNMA1-261ENST00000639486 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
KCNMA1-261ENST00000639486 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
KCNMA1-261ENST00000639486 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
KCNMA1-261ENST00000639486 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
KCNMA1-261ENST00000639486 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
KCNMA1-261ENST00000639486 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
KCNMA1-261ENST00000639486 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
KCNMA1-261ENST00000639486 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
KCNMA1-261ENST00000639486 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
KCNMA1-261ENST00000639486 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
KCNMA1-261ENST00000639486 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
KCNMA1-261ENST00000639486 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
KCNMA1-261ENST00000639486 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
KCNMA1-261ENST00000639486 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
KCNMA1-261ENST00000639486 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
KCNMA1-261ENST00000639486 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
KCNMA1-261ENST00000639486 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
KCNMA1-261ENST00000639486 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
KCNMA1-261ENST00000639486 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
KCNMA1-261ENST00000639486 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
KCNMA1-261ENST00000639486 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms