RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
PAX6-245ENST00000638914 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
PAX6-245ENST00000638914 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
PAX6-245ENST00000638914 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
PAX6-245ENST00000638914 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
PAX6-245ENST00000638914 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
PAX6-245ENST00000638914 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
PAX6-245ENST00000638914 MT1AP04731 61 aa3.5□□□□□ -1.85
PAX6-245ENST00000638914 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
PAX6-245ENST00000638914 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.86
PAX6-245ENST00000638914 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.86
PAX6-245ENST00000638914 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
PAX6-245ENST00000638914 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
PAX6-245ENST00000638914 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
PAX6-245ENST00000638914 LPAP08519 4548 aa3.44□□□□□ -1.86
PAX6-245ENST00000638914 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
PAX6-245ENST00000638914 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
PAX6-245ENST00000638914 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
PAX6-245ENST00000638914 HYDINQ4G0P3 5121 aa3.41□□□□□ -1.86
PAX6-245ENST00000638914 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
PAX6-245ENST00000638914 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
PAX6-245ENST00000638914 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
PAX6-245ENST00000638914 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
PAX6-245ENST00000638914 PRM1P04553 51 aa3.35□□□□□ -1.87
PAX6-245ENST00000638914 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
PAX6-245ENST00000638914 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
PAX6-245ENST00000638914 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
PAX6-245ENST00000638914 MUC2Q02817 5179 aa3.29□□□□□ -1.88
PAX6-245ENST00000638914 TNXBP22105 4242 aa3.28□□□□□ -1.88
PAX6-245ENST00000638914 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
PAX6-245ENST00000638914 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
PAX6-245ENST00000638914 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
PAX6-245ENST00000638914 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
PAX6-245ENST00000638914 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
PAX6-245ENST00000638914 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
PAX6-245ENST00000638914 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
PAX6-245ENST00000638914 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
PAX6-245ENST00000638914 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
PAX6-245ENST00000638914 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PAX6-245ENST00000638914 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
PAX6-245ENST00000638914 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
PAX6-245ENST00000638914 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
PAX6-245ENST00000638914 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
PAX6-245ENST00000638914 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
PAX6-245ENST00000638914 NEBP20929 6669 aa2.86□□□□□ -1.95
PAX6-245ENST00000638914 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
PAX6-245ENST00000638914 KMT2DO14686 5537 aa2.79□□□□□ -1.96
PAX6-245ENST00000638914 USH2AO75445 5202 aa2.78□□□□□ -1.96
PAX6-245ENST00000638914 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PAX6-245ENST00000638914 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
PAX6-245ENST00000638914 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
PAX6-245ENST00000638914 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
PAX6-245ENST00000638914 SSPOA2VEC9 5147 aa2.58□□□□□ -2
PAX6-245ENST00000638914 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
PAX6-245ENST00000638914 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
PAX6-245ENST00000638914 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
PAX6-245ENST00000638914 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
PAX6-245ENST00000638914 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
PAX6-245ENST00000638914 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
PAX6-245ENST00000638914 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
PAX6-245ENST00000638914 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
PAX6-245ENST00000638914 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
PAX6-245ENST00000638914 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
PAX6-245ENST00000638914 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
PAX6-245ENST00000638914 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
PAX6-245ENST00000638914 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PAX6-245ENST00000638914 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
PAX6-245ENST00000638914 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PAX6-245ENST00000638914 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
PAX6-245ENST00000638914 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
PAX6-245ENST00000638914 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
PAX6-245ENST00000638914 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
PAX6-245ENST00000638914 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
PAX6-245ENST00000638914 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
PAX6-245ENST00000638914 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
PAX6-245ENST00000638914 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
PAX6-245ENST00000638914 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 179 ms