RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 MT1EP04732 61 aa4.75□□□□□ -1.65
SCARB2-208ENST00000638372 SPRR2DP22532 72 aa4.75□□□□□ -1.65
SCARB2-208ENST00000638372 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
SCARB2-208ENST00000638372 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
SCARB2-208ENST00000638372 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
SCARB2-208ENST00000638372 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
SCARB2-208ENST00000638372 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
SCARB2-208ENST00000638372 MT1MQ8N339 61 aa4.57□□□□□ -1.68
SCARB2-208ENST00000638372 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
SCARB2-208ENST00000638372 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
SCARB2-208ENST00000638372 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
SCARB2-208ENST00000638372 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
SCARB2-208ENST00000638372 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
SCARB2-208ENST00000638372 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
SCARB2-208ENST00000638372 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
SCARB2-208ENST00000638372 USH2AO75445 5202 aa4.39□□□□□ -1.71
SCARB2-208ENST00000638372 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
SCARB2-208ENST00000638372 MT4P47944 62 aa4.3□□□□□ -1.72
SCARB2-208ENST00000638372 KMT2DO14686 5537 aa4.28□□□□□ -1.72
SCARB2-208ENST00000638372 MT3P25713 68 aa4.27□□□□□ -1.73
SCARB2-208ENST00000638372 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SCARB2-208ENST00000638372 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
SCARB2-208ENST00000638372 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
SCARB2-208ENST00000638372 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
SCARB2-208ENST00000638372 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
SCARB2-208ENST00000638372 MT1AP04731 61 aa4.18□□□□□ -1.74
SCARB2-208ENST00000638372 PRM1P04553 51 aa4.15□□□□□ -1.74
SCARB2-208ENST00000638372 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
SCARB2-208ENST00000638372 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
SCARB2-208ENST00000638372 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
SCARB2-208ENST00000638372 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
SCARB2-208ENST00000638372 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
SCARB2-208ENST00000638372 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SCARB2-208ENST00000638372 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
SCARB2-208ENST00000638372 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
SCARB2-208ENST00000638372 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
SCARB2-208ENST00000638372 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
SCARB2-208ENST00000638372 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
SCARB2-208ENST00000638372 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SCARB2-208ENST00000638372 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
SCARB2-208ENST00000638372 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
SCARB2-208ENST00000638372 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
SCARB2-208ENST00000638372 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
SCARB2-208ENST00000638372 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
SCARB2-208ENST00000638372 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SCARB2-208ENST00000638372 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SCARB2-208ENST00000638372 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
SCARB2-208ENST00000638372 NEBP20929 6669 aa3.55□□□□□ -1.84
SCARB2-208ENST00000638372 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
SCARB2-208ENST00000638372 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SCARB2-208ENST00000638372 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SCARB2-208ENST00000638372 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SCARB2-208ENST00000638372 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
SCARB2-208ENST00000638372 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
SCARB2-208ENST00000638372 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
SCARB2-208ENST00000638372 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
SCARB2-208ENST00000638372 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
SCARB2-208ENST00000638372 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
SCARB2-208ENST00000638372 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
SCARB2-208ENST00000638372 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SCARB2-208ENST00000638372 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
SCARB2-208ENST00000638372 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
SCARB2-208ENST00000638372 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
SCARB2-208ENST00000638372 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
SCARB2-208ENST00000638372 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SCARB2-208ENST00000638372 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
SCARB2-208ENST00000638372 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SCARB2-208ENST00000638372 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SCARB2-208ENST00000638372 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
SCARB2-208ENST00000638372 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
SCARB2-208ENST00000638372 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SCARB2-208ENST00000638372 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SCARB2-208ENST00000638372 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SCARB2-208ENST00000638372 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SCARB2-208ENST00000638372 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
SCARB2-208ENST00000638372 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SCARB2-208ENST00000638372 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
SCARB2-208ENST00000638372 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 120.7 ms