RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
UBE3A-227ENST00000638011 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
UBE3A-227ENST00000638011 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
UBE3A-227ENST00000638011 LRP2P98164 4655 aa4.04□□□□□ -1.76
UBE3A-227ENST00000638011 HERC1Q15751 4861 aa4.03□□□□□ -1.76
UBE3A-227ENST00000638011 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
UBE3A-227ENST00000638011 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
UBE3A-227ENST00000638011 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
UBE3A-227ENST00000638011 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
UBE3A-227ENST00000638011 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
UBE3A-227ENST00000638011 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
UBE3A-227ENST00000638011 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.78
UBE3A-227ENST00000638011 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
UBE3A-227ENST00000638011 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
UBE3A-227ENST00000638011 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
UBE3A-227ENST00000638011 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
UBE3A-227ENST00000638011 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
UBE3A-227ENST00000638011 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
UBE3A-227ENST00000638011 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
UBE3A-227ENST00000638011 KMT2CQ8NEZ4 4911 aaKnown RBP3.81□□□□□ -1.8
UBE3A-227ENST00000638011 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
UBE3A-227ENST00000638011 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
UBE3A-227ENST00000638011 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
UBE3A-227ENST00000638011 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
UBE3A-227ENST00000638011 LPAP08519 4548 aa3.79□□□□□ -1.8
UBE3A-227ENST00000638011 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
UBE3A-227ENST00000638011 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
UBE3A-227ENST00000638011 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
UBE3A-227ENST00000638011 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
UBE3A-227ENST00000638011 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
UBE3A-227ENST00000638011 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
UBE3A-227ENST00000638011 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
UBE3A-227ENST00000638011 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
UBE3A-227ENST00000638011 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
UBE3A-227ENST00000638011 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
UBE3A-227ENST00000638011 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
UBE3A-227ENST00000638011 MUC2Q02817 5179 aa3.5□□□□□ -1.85
UBE3A-227ENST00000638011 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
UBE3A-227ENST00000638011 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
UBE3A-227ENST00000638011 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
UBE3A-227ENST00000638011 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
UBE3A-227ENST00000638011 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
UBE3A-227ENST00000638011 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
UBE3A-227ENST00000638011 NEBP20929 6669 aa3.05□□□□□ -1.92
UBE3A-227ENST00000638011 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
UBE3A-227ENST00000638011 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
UBE3A-227ENST00000638011 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
UBE3A-227ENST00000638011 KMT2DO14686 5537 aa2.98□□□□□ -1.93
UBE3A-227ENST00000638011 USH2AO75445 5202 aa2.98□□□□□ -1.93
UBE3A-227ENST00000638011 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
UBE3A-227ENST00000638011 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
UBE3A-227ENST00000638011 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
UBE3A-227ENST00000638011 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
UBE3A-227ENST00000638011 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
UBE3A-227ENST00000638011 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
UBE3A-227ENST00000638011 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
UBE3A-227ENST00000638011 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
UBE3A-227ENST00000638011 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
UBE3A-227ENST00000638011 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
UBE3A-227ENST00000638011 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
UBE3A-227ENST00000638011 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
UBE3A-227ENST00000638011 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
UBE3A-227ENST00000638011 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
UBE3A-227ENST00000638011 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
UBE3A-227ENST00000638011 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
UBE3A-227ENST00000638011 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-227ENST00000638011 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
UBE3A-227ENST00000638011 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
UBE3A-227ENST00000638011 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
UBE3A-227ENST00000638011 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
UBE3A-227ENST00000638011 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
UBE3A-227ENST00000638011 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
UBE3A-227ENST00000638011 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
UBE3A-227ENST00000638011 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
UBE3A-227ENST00000638011 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
UBE3A-227ENST00000638011 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
UBE3A-227ENST00000638011 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms