RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CACNA1A-253ENST00000637927 MT1EP04732 61 aa5.26□□□□□ -1.57
CACNA1A-253ENST00000637927 LRP2P98164 4655 aa5.24□□□□□ -1.57
CACNA1A-253ENST00000637927 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.57
CACNA1A-253ENST00000637927 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
CACNA1A-253ENST00000637927 MT3P25713 68 aa5.17□□□□□ -1.58
CACNA1A-253ENST00000637927 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
CACNA1A-253ENST00000637927 MT1MQ8N339 61 aa5.15□□□□□ -1.58
CACNA1A-253ENST00000637927 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
CACNA1A-253ENST00000637927 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-253ENST00000637927 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
CACNA1A-253ENST00000637927 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
CACNA1A-253ENST00000637927 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
CACNA1A-253ENST00000637927 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
CACNA1A-253ENST00000637927 HERC1Q15751 4861 aa4.94□□□□□ -1.62
CACNA1A-253ENST00000637927 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
CACNA1A-253ENST00000637927 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
CACNA1A-253ENST00000637927 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
CACNA1A-253ENST00000637927 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CACNA1A-253ENST00000637927 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
CACNA1A-253ENST00000637927 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CACNA1A-253ENST00000637927 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
CACNA1A-253ENST00000637927 MT1AP04731 61 aa4.66□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
CACNA1A-253ENST00000637927 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
CACNA1A-253ENST00000637927 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
CACNA1A-253ENST00000637927 MUC2Q02817 5179 aa4.51□□□□□ -1.69
CACNA1A-253ENST00000637927 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
CACNA1A-253ENST00000637927 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
CACNA1A-253ENST00000637927 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
CACNA1A-253ENST00000637927 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
CACNA1A-253ENST00000637927 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
CACNA1A-253ENST00000637927 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CACNA1A-253ENST00000637927 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CACNA1A-253ENST00000637927 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
CACNA1A-253ENST00000637927 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
CACNA1A-253ENST00000637927 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
CACNA1A-253ENST00000637927 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CACNA1A-253ENST00000637927 KMT2DO14686 5537 aa3.93□□□□□ -1.78
CACNA1A-253ENST00000637927 USH2AO75445 5202 aa3.84□□□□□ -1.79
CACNA1A-253ENST00000637927 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
CACNA1A-253ENST00000637927 NEBP20929 6669 aa3.57□□□□□ -1.84
CACNA1A-253ENST00000637927 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
CACNA1A-253ENST00000637927 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
CACNA1A-253ENST00000637927 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
CACNA1A-253ENST00000637927 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
CACNA1A-253ENST00000637927 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CACNA1A-253ENST00000637927 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CACNA1A-253ENST00000637927 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-253ENST00000637927 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CACNA1A-253ENST00000637927 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
CACNA1A-253ENST00000637927 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
CACNA1A-253ENST00000637927 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CACNA1A-253ENST00000637927 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
CACNA1A-253ENST00000637927 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CACNA1A-253ENST00000637927 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
CACNA1A-253ENST00000637927 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
CACNA1A-253ENST00000637927 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CACNA1A-253ENST00000637927 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CACNA1A-253ENST00000637927 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CACNA1A-253ENST00000637927 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CACNA1A-253ENST00000637927 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CACNA1A-253ENST00000637927 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.09
CACNA1A-253ENST00000637927 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CACNA1A-253ENST00000637927 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
CACNA1A-253ENST00000637927 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms