RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 LRP2P98164 4655 aa4.9□□□□□ -1.62
CACNA1A-247ENST00000637769 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
CACNA1A-247ENST00000637769 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
CACNA1A-247ENST00000637769 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
CACNA1A-247ENST00000637769 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
CACNA1A-247ENST00000637769 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
CACNA1A-247ENST00000637769 RYR3Q15413 4870 aa4.88□□□□□ -1.63
CACNA1A-247ENST00000637769 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
CACNA1A-247ENST00000637769 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
CACNA1A-247ENST00000637769 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
CACNA1A-247ENST00000637769 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
CACNA1A-247ENST00000637769 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
CACNA1A-247ENST00000637769 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
CACNA1A-247ENST00000637769 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
CACNA1A-247ENST00000637769 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.66
CACNA1A-247ENST00000637769 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
CACNA1A-247ENST00000637769 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
CACNA1A-247ENST00000637769 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
CACNA1A-247ENST00000637769 HERC2O95714 4834 aa4.51□□□□□ -1.69
CACNA1A-247ENST00000637769 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
CACNA1A-247ENST00000637769 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
CACNA1A-247ENST00000637769 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
CACNA1A-247ENST00000637769 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CACNA1A-247ENST00000637769 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
CACNA1A-247ENST00000637769 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
CACNA1A-247ENST00000637769 RYR2Q92736 4967 aa4.34□□□□□ -1.71
CACNA1A-247ENST00000637769 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CACNA1A-247ENST00000637769 HERC1Q15751 4861 aa4.31□□□□□ -1.72
CACNA1A-247ENST00000637769 KIAA1109Q2LD37 5005 aa4.23□□□□□ -1.73
CACNA1A-247ENST00000637769 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
CACNA1A-247ENST00000637769 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
CACNA1A-247ENST00000637769 EPPK1P58107 5090 aaKnown RBP4.14□□□□□ -1.75
CACNA1A-247ENST00000637769 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
CACNA1A-247ENST00000637769 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
CACNA1A-247ENST00000637769 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CACNA1A-247ENST00000637769 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
CACNA1A-247ENST00000637769 MUC2Q02817 5179 aa3.82□□□□□ -1.8
CACNA1A-247ENST00000637769 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
CACNA1A-247ENST00000637769 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
CACNA1A-247ENST00000637769 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CACNA1A-247ENST00000637769 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
CACNA1A-247ENST00000637769 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
CACNA1A-247ENST00000637769 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
CACNA1A-247ENST00000637769 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
CACNA1A-247ENST00000637769 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
CACNA1A-247ENST00000637769 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
CACNA1A-247ENST00000637769 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
CACNA1A-247ENST00000637769 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CACNA1A-247ENST00000637769 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
CACNA1A-247ENST00000637769 NEBP20929 6669 aa3.44□□□□□ -1.86
CACNA1A-247ENST00000637769 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
CACNA1A-247ENST00000637769 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
CACNA1A-247ENST00000637769 KMT2DO14686 5537 aa3.4□□□□□ -1.87
CACNA1A-247ENST00000637769 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
CACNA1A-247ENST00000637769 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
CACNA1A-247ENST00000637769 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
CACNA1A-247ENST00000637769 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
CACNA1A-247ENST00000637769 USH2AO75445 5202 aa3.05□□□□□ -1.92
CACNA1A-247ENST00000637769 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
CACNA1A-247ENST00000637769 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
CACNA1A-247ENST00000637769 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
CACNA1A-247ENST00000637769 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
CACNA1A-247ENST00000637769 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
CACNA1A-247ENST00000637769 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
CACNA1A-247ENST00000637769 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
CACNA1A-247ENST00000637769 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CACNA1A-247ENST00000637769 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CACNA1A-247ENST00000637769 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CACNA1A-247ENST00000637769 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
CACNA1A-247ENST00000637769 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
CACNA1A-247ENST00000637769 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
CACNA1A-247ENST00000637769 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
CACNA1A-247ENST00000637769 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CACNA1A-247ENST00000637769 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
CACNA1A-247ENST00000637769 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CACNA1A-247ENST00000637769 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
CACNA1A-247ENST00000637769 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms