RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SPRR2BP35325 72 aa5.05□□□□□ -1.6
CLN5-218ENST00000637397 SPRR2AP35326 72 aa5.05□□□□□ -1.6
CLN5-218ENST00000637397 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
CLN5-218ENST00000637397 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
CLN5-218ENST00000637397 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
CLN5-218ENST00000637397 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
CLN5-218ENST00000637397 MT1MQ8N339 61 aa4.96□□□□□ -1.62
CLN5-218ENST00000637397 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
CLN5-218ENST00000637397 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
CLN5-218ENST00000637397 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
CLN5-218ENST00000637397 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
CLN5-218ENST00000637397 SPRR2DP22532 72 aa4.85□□□□□ -1.63
CLN5-218ENST00000637397 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
CLN5-218ENST00000637397 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
CLN5-218ENST00000637397 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
CLN5-218ENST00000637397 PRM1P04553 51 aa4.74□□□□□ -1.65
CLN5-218ENST00000637397 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
CLN5-218ENST00000637397 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.65
CLN5-218ENST00000637397 KMT2DO14686 5537 aa4.67□□□□□ -1.66
CLN5-218ENST00000637397 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
CLN5-218ENST00000637397 USH2AO75445 5202 aa4.64□□□□□ -1.67
CLN5-218ENST00000637397 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
CLN5-218ENST00000637397 MT3P25713 68 aa4.59□□□□□ -1.67
CLN5-218ENST00000637397 MT1AP04731 61 aa4.56□□□□□ -1.68
CLN5-218ENST00000637397 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
CLN5-218ENST00000637397 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
CLN5-218ENST00000637397 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
CLN5-218ENST00000637397 MT4P47944 62 aa4.38□□□□□ -1.71
CLN5-218ENST00000637397 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
CLN5-218ENST00000637397 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
CLN5-218ENST00000637397 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
CLN5-218ENST00000637397 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
CLN5-218ENST00000637397 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
CLN5-218ENST00000637397 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
CLN5-218ENST00000637397 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
CLN5-218ENST00000637397 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
CLN5-218ENST00000637397 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
CLN5-218ENST00000637397 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CLN5-218ENST00000637397 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
CLN5-218ENST00000637397 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
CLN5-218ENST00000637397 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
CLN5-218ENST00000637397 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
CLN5-218ENST00000637397 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
CLN5-218ENST00000637397 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
CLN5-218ENST00000637397 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
CLN5-218ENST00000637397 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
CLN5-218ENST00000637397 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CLN5-218ENST00000637397 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
CLN5-218ENST00000637397 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
CLN5-218ENST00000637397 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CLN5-218ENST00000637397 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
CLN5-218ENST00000637397 NEBP20929 6669 aa3.44□□□□□ -1.86
CLN5-218ENST00000637397 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CLN5-218ENST00000637397 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
CLN5-218ENST00000637397 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CLN5-218ENST00000637397 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
CLN5-218ENST00000637397 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CLN5-218ENST00000637397 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
CLN5-218ENST00000637397 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
CLN5-218ENST00000637397 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
CLN5-218ENST00000637397 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
CLN5-218ENST00000637397 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
CLN5-218ENST00000637397 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
CLN5-218ENST00000637397 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
CLN5-218ENST00000637397 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
CLN5-218ENST00000637397 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
CLN5-218ENST00000637397 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
CLN5-218ENST00000637397 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CLN5-218ENST00000637397 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
CLN5-218ENST00000637397 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
CLN5-218ENST00000637397 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
CLN5-218ENST00000637397 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
CLN5-218ENST00000637397 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
CLN5-218ENST00000637397 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CLN5-218ENST00000637397 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
CLN5-218ENST00000637397 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CLN5-218ENST00000637397 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
CLN5-218ENST00000637397 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 48.5 ms