RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
SCN2A-216ENST00000637367 MT1GP13640 62 aa2.27□□□□□ -2.05
SCN2A-216ENST00000637367 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
SCN2A-216ENST00000637367 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
SCN2A-216ENST00000637367 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
SCN2A-216ENST00000637367 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
SCN2A-216ENST00000637367 RNF213Q63HN8 5207 aa2.21□□□□□ -2.05
SCN2A-216ENST00000637367 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
SCN2A-216ENST00000637367 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SCN2A-216ENST00000637367 KRTAP19-4Q3LI73 84 aa2.14□□□□□ -2.07
SCN2A-216ENST00000637367 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
SCN2A-216ENST00000637367 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
SCN2A-216ENST00000637367 SPRR2EP22531 72 aa2.12□□□□□ -2.07
SCN2A-216ENST00000637367 SPRR2BP35325 72 aa2.12□□□□□ -2.07
SCN2A-216ENST00000637367 SPRR2AP35326 72 aa2.12□□□□□ -2.07
SCN2A-216ENST00000637367 MT1LQ93083 61 aa2.12□□□□□ -2.07
SCN2A-216ENST00000637367 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
SCN2A-216ENST00000637367 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
SCN2A-216ENST00000637367 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
SCN2A-216ENST00000637367 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
SCN2A-216ENST00000637367 MT1EP04732 61 aa2.09□□□□□ -2.07
SCN2A-216ENST00000637367 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
SCN2A-216ENST00000637367 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.08
SCN2A-216ENST00000637367 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
SCN2A-216ENST00000637367 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
SCN2A-216ENST00000637367 SPRR2DP22532 72 aa2.03□□□□□ -2.08
SCN2A-216ENST00000637367 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
SCN2A-216ENST00000637367 MT1MQ8N339 61 aa2.02□□□□□ -2.09
SCN2A-216ENST00000637367 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
SCN2A-216ENST00000637367 USH2AO75445 5202 aa2□□□□□ -2.09
SCN2A-216ENST00000637367 PRM1P04553 51 aa1.99□□□□□ -2.09
SCN2A-216ENST00000637367 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
SCN2A-216ENST00000637367 KMT2DO14686 5537 aa1.97□□□□□ -2.09
SCN2A-216ENST00000637367 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
SCN2A-216ENST00000637367 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
SCN2A-216ENST00000637367 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
SCN2A-216ENST00000637367 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
SCN2A-216ENST00000637367 KRTAP19-6Q3LI70 58 aa1.91□□□□□ -2.1
SCN2A-216ENST00000637367 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
SCN2A-216ENST00000637367 MT4P47944 62 aa1.89□□□□□ -2.11
SCN2A-216ENST00000637367 MT3P25713 68 aa1.89□□□□□ -2.11
SCN2A-216ENST00000637367 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SCN2A-216ENST00000637367 LCE1AQ5T7P2 110 aa1.87□□□□□ -2.11
SCN2A-216ENST00000637367 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SCN2A-216ENST00000637367 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
SCN2A-216ENST00000637367 MT1AP04731 61 aa1.84□□□□□ -2.12
SCN2A-216ENST00000637367 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
SCN2A-216ENST00000637367 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
SCN2A-216ENST00000637367 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
SCN2A-216ENST00000637367 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
SCN2A-216ENST00000637367 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
SCN2A-216ENST00000637367 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
SCN2A-216ENST00000637367 KRTAP2-2Q9BYT5 123 aa1.66□□□□□ -2.14
SCN2A-216ENST00000637367 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
SCN2A-216ENST00000637367 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
SCN2A-216ENST00000637367 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
SCN2A-216ENST00000637367 KRTAP20-1Q3LI63 56 aa1.51□□□□□ -2.17
SCN2A-216ENST00000637367 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
SCN2A-216ENST00000637367 LCE1EQ5T753 118 aa1.49□□□□□ -2.17
SCN2A-216ENST00000637367 NEBP20929 6669 aa1.49□□□□□ -2.17
SCN2A-216ENST00000637367 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
SCN2A-216ENST00000637367 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
SCN2A-216ENST00000637367 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SCN2A-216ENST00000637367 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
SCN2A-216ENST00000637367 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
SCN2A-216ENST00000637367 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
SCN2A-216ENST00000637367 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
SCN2A-216ENST00000637367 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
SCN2A-216ENST00000637367 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
SCN2A-216ENST00000637367 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
SCN2A-216ENST00000637367 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
SCN2A-216ENST00000637367 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
SCN2A-216ENST00000637367 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
SCN2A-216ENST00000637367 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
SCN2A-216ENST00000637367 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
SCN2A-216ENST00000637367 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SCN2A-216ENST00000637367 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
SCN2A-216ENST00000637367 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms