RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
SCN2A-216ENST00000637367 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
SCN2A-216ENST00000637367 SHROOM4Q9ULL8 1493 aa10.74□□□□□ -0.69
SCN2A-216ENST00000637367 NISCHQ9Y2I1 1504 aa10.71□□□□□ -0.7
SCN2A-216ENST00000637367 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
SCN2A-216ENST00000637367 PCGF6Q9BYE7 350 aa10.44□□□□□ -0.74
SCN2A-216ENST00000637367 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
SCN2A-216ENST00000637367 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
SCN2A-216ENST00000637367 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
SCN2A-216ENST00000637367 APLP2Q06481 763 aa10.05□□□□□ -0.8
SCN2A-216ENST00000637367 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
SCN2A-216ENST00000637367 CCER1Q8TC90 406 aaPredicted RBP10.04□□□□□ -0.8
SCN2A-216ENST00000637367 PPARGC1BQ86YN6 1023 aaKnown RBP10.04□□□□□ -0.8
SCN2A-216ENST00000637367 TRIM41Q8WV44 630 aa10□□□□□ -0.81
SCN2A-216ENST00000637367 CENPBP07199 599 aaPredicted RBP9.99□□□□□ -0.81
SCN2A-216ENST00000637367 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
SCN2A-216ENST00000637367 HRCP23327 699 aa9.95□□□□□ -0.82
SCN2A-216ENST00000637367 ZEB1P37275 1124 aaPredicted RBP9.94□□□□□ -0.82
SCN2A-216ENST00000637367 LOC105371045A0A1W2PR82 267 aa9.91□□□□□ -0.82
SCN2A-216ENST00000637367 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
SCN2A-216ENST00000637367 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
SCN2A-216ENST00000637367 CHIC1Q5VXU3 224 aa9.81□□□□□ -0.84
SCN2A-216ENST00000637367 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
SCN2A-216ENST00000637367 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
SCN2A-216ENST00000637367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.68□□□□□ -0.86
SCN2A-216ENST00000637367 NEFLP07196 543 aa9.68□□□□□ -0.86
SCN2A-216ENST00000637367 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
SCN2A-216ENST00000637367 ITGAEP38570 1179 aa9.65□□□□□ -0.86
SCN2A-216ENST00000637367 MYT1Q01538 1121 aa9.6□□□□□ -0.87
SCN2A-216ENST00000637367 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
SCN2A-216ENST00000637367 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
SCN2A-216ENST00000637367 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
SCN2A-216ENST00000637367 POLR3GLQ9BT43 218 aa9.5□□□□□ -0.89
SCN2A-216ENST00000637367 BCANQ96GW7 911 aa9.45□□□□□ -0.9
SCN2A-216ENST00000637367 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
SCN2A-216ENST00000637367 NEUROD1Q13562 356 aa9.33□□□□□ -0.92
SCN2A-216ENST00000637367 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
SCN2A-216ENST00000637367 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
SCN2A-216ENST00000637367 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
SCN2A-216ENST00000637367 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
SCN2A-216ENST00000637367 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SCN2A-216ENST00000637367 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
SCN2A-216ENST00000637367 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCN2A-216ENST00000637367 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
SCN2A-216ENST00000637367 CLSPNQ9HAW4 1339 aa9.17□□□□□ -0.94
SCN2A-216ENST00000637367 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
SCN2A-216ENST00000637367 ANP32CO43423 234 aa9.17□□□□□ -0.94
SCN2A-216ENST00000637367 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.94
SCN2A-216ENST00000637367 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
SCN2A-216ENST00000637367 P3H3Q8IVL6 736 aa9.13□□□□□ -0.95
SCN2A-216ENST00000637367 FKBP8Q14318 412 aa9.12□□□□□ -0.95
SCN2A-216ENST00000637367 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
SCN2A-216ENST00000637367 ABCC9O60706 1549 aa9.11□□□□□ -0.95
SCN2A-216ENST00000637367 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
SCN2A-216ENST00000637367 CCDC180Q9P1Z9 1646 aa9.1□□□□□ -0.95
SCN2A-216ENST00000637367 ARID3CA6NKF2 412 aa9.09□□□□□ -0.95
SCN2A-216ENST00000637367 MIER1Q8N108 512 aa9.08□□□□□ -0.96
SCN2A-216ENST00000637367 DCAF1Q9Y4B6 1507 aa9.08□□□□□ -0.96
SCN2A-216ENST00000637367 DDX10Q13206 875 aaKnown RBP9.08□□□□□ -0.96
SCN2A-216ENST00000637367 AEBP2Q6ZN18 517 aaPredicted RBP9.07□□□□□ -0.96
SCN2A-216ENST00000637367 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
SCN2A-216ENST00000637367 BCL11AQ9H165 835 aa9.05□□□□□ -0.96
SCN2A-216ENST00000637367 HIRIP3Q9BW71 556 aaPredicted RBP9.04□□□□□ -0.96
SCN2A-216ENST00000637367 HNRNPUQ00839 825 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCN2A-216ENST00000637367 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
SCN2A-216ENST00000637367 FAM9BQ8IZU0 186 aa8.99□□□□□ -0.97
SCN2A-216ENST00000637367 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
SCN2A-216ENST00000637367 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
SCN2A-216ENST00000637367 NBR1Q14596 966 aa8.96□□□□□ -0.97
SCN2A-216ENST00000637367 EIF5BO60841 1220 aaKnown RBP8.95□□□□□ -0.98
SCN2A-216ENST00000637367 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
SCN2A-216ENST00000637367 FBLN2P98095 1184 aa8.94□□□□□ -0.98
SCN2A-216ENST00000637367 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
SCN2A-216ENST00000637367 TONSLQ96HA7 1378 aa8.92□□□□□ -0.98
SCN2A-216ENST00000637367 CANXP27824 592 aaKnown RBP8.91□□□□□ -0.98
SCN2A-216ENST00000637367 CHIC2Q9UKJ5 165 aa8.9□□□□□ -0.98
SCN2A-216ENST00000637367 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
SCN2A-216ENST00000637367 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
SCN2A-216ENST00000637367 SCRIBQ14160 1630 aa8.87□□□□□ -0.99
SCN2A-216ENST00000637367 ARXQ96QS3 562 aa8.86□□□□□ -0.99
SCN2A-216ENST00000637367 MRS2Q9HD23 443 aa8.86□□□□□ -0.99
SCN2A-216ENST00000637367 ZBTB47Q9UFB7 747 aaPredicted RBP8.82□□□□□ -1
SCN2A-216ENST00000637367 TMC1Q8TDI8 760 aa8.82□□□□□ -1
SCN2A-216ENST00000637367 SLC24A1O60721 1099 aa8.81□□□□□ -1
SCN2A-216ENST00000637367 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
SCN2A-216ENST00000637367 CLIP1P30622 1438 aa8.8□□□□□ -1
SCN2A-216ENST00000637367 ANP32EQ9BTT0 268 aa8.8□□□□□ -1
SCN2A-216ENST00000637367 KDM2AQ9Y2K7 1162 aa8.79□□□□□ -1
SCN2A-216ENST00000637367 CEP162Q5TB80 1403 aa8.79□□□□□ -1
SCN2A-216ENST00000637367 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
SCN2A-216ENST00000637367 RRP7BPQ9NSQ0 103 aa8.77□□□□□ -1.01
SCN2A-216ENST00000637367 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
SCN2A-216ENST00000637367 CHGAP10645 457 aaKnown RBP8.74□□□□□ -1.01
SCN2A-216ENST00000637367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.01
SCN2A-216ENST00000637367 HSP90AA1P07900 732 aaKnown RBP8.74□□□□□ -1.01
SCN2A-216ENST00000637367 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
SCN2A-216ENST00000637367 EIF4G2P78344 907 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCN2A-216ENST00000637367 NEFMP07197 916 aa8.71□□□□□ -1.02
SCN2A-216ENST00000637367 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.02
SCN2A-216ENST00000637367 MTUS2Q5JR59 1369 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms