RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 MT1LQ93083 61 aa5.03□□□□□ -1.6
CACNA1A-238ENST00000637276 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
CACNA1A-238ENST00000637276 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
CACNA1A-238ENST00000637276 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
CACNA1A-238ENST00000637276 MT3P25713 68 aa4.99□□□□□ -1.61
CACNA1A-238ENST00000637276 KRTAP19-6Q3LI70 58 aa4.98□□□□□ -1.61
CACNA1A-238ENST00000637276 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CACNA1A-238ENST00000637276 MT1EP04732 61 aa4.96□□□□□ -1.62
CACNA1A-238ENST00000637276 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
CACNA1A-238ENST00000637276 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CACNA1A-238ENST00000637276 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
CACNA1A-238ENST00000637276 HERC2O95714 4834 aa4.79□□□□□ -1.64
CACNA1A-238ENST00000637276 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
CACNA1A-238ENST00000637276 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
CACNA1A-238ENST00000637276 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CACNA1A-238ENST00000637276 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
CACNA1A-238ENST00000637276 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
CACNA1A-238ENST00000637276 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
CACNA1A-238ENST00000637276 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
CACNA1A-238ENST00000637276 HERC1Q15751 4861 aa4.59□□□□□ -1.67
CACNA1A-238ENST00000637276 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
CACNA1A-238ENST00000637276 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CACNA1A-238ENST00000637276 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
CACNA1A-238ENST00000637276 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
CACNA1A-238ENST00000637276 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
CACNA1A-238ENST00000637276 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
CACNA1A-238ENST00000637276 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
CACNA1A-238ENST00000637276 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
CACNA1A-238ENST00000637276 MUC2Q02817 5179 aa4.44□□□□□ -1.7
CACNA1A-238ENST00000637276 MT1AP04731 61 aa4.43□□□□□ -1.7
CACNA1A-238ENST00000637276 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
CACNA1A-238ENST00000637276 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
CACNA1A-238ENST00000637276 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
CACNA1A-238ENST00000637276 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
CACNA1A-238ENST00000637276 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
CACNA1A-238ENST00000637276 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
CACNA1A-238ENST00000637276 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
CACNA1A-238ENST00000637276 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
CACNA1A-238ENST00000637276 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
CACNA1A-238ENST00000637276 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.74
CACNA1A-238ENST00000637276 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
CACNA1A-238ENST00000637276 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-238ENST00000637276 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
CACNA1A-238ENST00000637276 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
CACNA1A-238ENST00000637276 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
CACNA1A-238ENST00000637276 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CACNA1A-238ENST00000637276 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
CACNA1A-238ENST00000637276 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
CACNA1A-238ENST00000637276 USH2AO75445 5202 aa3.94□□□□□ -1.78
CACNA1A-238ENST00000637276 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
CACNA1A-238ENST00000637276 KMT2DO14686 5537 aa3.85□□□□□ -1.79
CACNA1A-238ENST00000637276 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
CACNA1A-238ENST00000637276 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
CACNA1A-238ENST00000637276 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
CACNA1A-238ENST00000637276 NEBP20929 6669 aa3.3□□□□□ -1.88
CACNA1A-238ENST00000637276 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CACNA1A-238ENST00000637276 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
CACNA1A-238ENST00000637276 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
CACNA1A-238ENST00000637276 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
CACNA1A-238ENST00000637276 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CACNA1A-238ENST00000637276 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CACNA1A-238ENST00000637276 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
CACNA1A-238ENST00000637276 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
CACNA1A-238ENST00000637276 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CACNA1A-238ENST00000637276 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CACNA1A-238ENST00000637276 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
CACNA1A-238ENST00000637276 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
CACNA1A-238ENST00000637276 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
CACNA1A-238ENST00000637276 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
CACNA1A-238ENST00000637276 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
CACNA1A-238ENST00000637276 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CACNA1A-238ENST00000637276 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
CACNA1A-238ENST00000637276 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CACNA1A-238ENST00000637276 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
CACNA1A-238ENST00000637276 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CACNA1A-238ENST00000637276 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
CACNA1A-238ENST00000637276 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 105.3 ms