RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
CACNB4-239ENST00000636947 MT3P25713 68 aa2.7□□□□□ -1.98
CACNB4-239ENST00000636947 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
CACNB4-239ENST00000636947 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
CACNB4-239ENST00000636947 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
CACNB4-239ENST00000636947 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
CACNB4-239ENST00000636947 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CACNB4-239ENST00000636947 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CACNB4-239ENST00000636947 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
CACNB4-239ENST00000636947 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
CACNB4-239ENST00000636947 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
CACNB4-239ENST00000636947 MUC2Q02817 5179 aa2.62□□□□□ -1.99
CACNB4-239ENST00000636947 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
CACNB4-239ENST00000636947 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
CACNB4-239ENST00000636947 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
CACNB4-239ENST00000636947 MT1LQ93083 61 aa2.61□□□□□ -1.99
CACNB4-239ENST00000636947 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
CACNB4-239ENST00000636947 MT1EP04732 61 aa2.6□□□□□ -1.99
CACNB4-239ENST00000636947 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
CACNB4-239ENST00000636947 RNF213Q63HN8 5207 aa2.59□□□□□ -1.99
CACNB4-239ENST00000636947 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
CACNB4-239ENST00000636947 MT1MQ8N339 61 aa2.57□□□□□ -2
CACNB4-239ENST00000636947 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
CACNB4-239ENST00000636947 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
CACNB4-239ENST00000636947 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
CACNB4-239ENST00000636947 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
CACNB4-239ENST00000636947 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
CACNB4-239ENST00000636947 PRM1P04553 51 aa2.45□□□□□ -2.02
CACNB4-239ENST00000636947 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
CACNB4-239ENST00000636947 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
CACNB4-239ENST00000636947 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
CACNB4-239ENST00000636947 MT1AP04731 61 aa2.42□□□□□ -2.02
CACNB4-239ENST00000636947 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
CACNB4-239ENST00000636947 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
CACNB4-239ENST00000636947 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.03
CACNB4-239ENST00000636947 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
CACNB4-239ENST00000636947 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
CACNB4-239ENST00000636947 NEBP20929 6669 aa2.27□□□□□ -2.05
CACNB4-239ENST00000636947 USH2AO75445 5202 aa2.25□□□□□ -2.05
CACNB4-239ENST00000636947 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
CACNB4-239ENST00000636947 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
CACNB4-239ENST00000636947 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
CACNB4-239ENST00000636947 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
CACNB4-239ENST00000636947 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.06
CACNB4-239ENST00000636947 KMT2DO14686 5537 aa2.14□□□□□ -2.07
CACNB4-239ENST00000636947 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
CACNB4-239ENST00000636947 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
CACNB4-239ENST00000636947 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
CACNB4-239ENST00000636947 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
CACNB4-239ENST00000636947 SSPOA2VEC9 5147 aa2.09□□□□□ -2.08
CACNB4-239ENST00000636947 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
CACNB4-239ENST00000636947 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
CACNB4-239ENST00000636947 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
CACNB4-239ENST00000636947 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
CACNB4-239ENST00000636947 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
CACNB4-239ENST00000636947 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
CACNB4-239ENST00000636947 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
CACNB4-239ENST00000636947 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
CACNB4-239ENST00000636947 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
CACNB4-239ENST00000636947 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
CACNB4-239ENST00000636947 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CACNB4-239ENST00000636947 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
CACNB4-239ENST00000636947 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CACNB4-239ENST00000636947 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
CACNB4-239ENST00000636947 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
CACNB4-239ENST00000636947 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CACNB4-239ENST00000636947 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
CACNB4-239ENST00000636947 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
CACNB4-239ENST00000636947 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CACNB4-239ENST00000636947 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
CACNB4-239ENST00000636947 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
CACNB4-239ENST00000636947 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
CACNB4-239ENST00000636947 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
CACNB4-239ENST00000636947 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
CACNB4-239ENST00000636947 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
CACNB4-239ENST00000636947 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
CACNB4-239ENST00000636947 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 93.2 ms