RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 LRP2P98164 4655 aa2.69□□□□□ -1.98
CHRNA7-219ENST00000636709 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
CHRNA7-219ENST00000636709 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.99
CHRNA7-219ENST00000636709 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
CHRNA7-219ENST00000636709 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
CHRNA7-219ENST00000636709 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
CHRNA7-219ENST00000636709 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
CHRNA7-219ENST00000636709 RYR2Q92736 4967 aa2.64□□□□□ -1.99
CHRNA7-219ENST00000636709 MUC17Q685J3 4493 aa2.6□□□□□ -1.99
CHRNA7-219ENST00000636709 HERC1Q15751 4861 aa2.57□□□□□ -2
CHRNA7-219ENST00000636709 KIAA1109Q2LD37 5005 aa2.56□□□□□ -2
CHRNA7-219ENST00000636709 HERC2O95714 4834 aa2.55□□□□□ -2
CHRNA7-219ENST00000636709 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
CHRNA7-219ENST00000636709 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
CHRNA7-219ENST00000636709 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
CHRNA7-219ENST00000636709 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
CHRNA7-219ENST00000636709 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
CHRNA7-219ENST00000636709 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
CHRNA7-219ENST00000636709 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
CHRNA7-219ENST00000636709 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
CHRNA7-219ENST00000636709 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
CHRNA7-219ENST00000636709 MT1AP04731 61 aa2.47□□□□□ -2.01
CHRNA7-219ENST00000636709 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
CHRNA7-219ENST00000636709 BIRC6Q9NR09 4857 aa2.45□□□□□ -2.02
CHRNA7-219ENST00000636709 LCE2AQ5TA79 106 aaPredicted RBP2.44□□□□□ -2.02
CHRNA7-219ENST00000636709 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
CHRNA7-219ENST00000636709 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.02
CHRNA7-219ENST00000636709 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.02
CHRNA7-219ENST00000636709 LCE4AQ5TA78 99 aa2.4□□□□□ -2.02
CHRNA7-219ENST00000636709 KRTAP9-4Q9BYQ2 154 aa2.35□□□□□ -2.03
CHRNA7-219ENST00000636709 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
CHRNA7-219ENST00000636709 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
CHRNA7-219ENST00000636709 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
CHRNA7-219ENST00000636709 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
CHRNA7-219ENST00000636709 MUC2Q02817 5179 aa2.27□□□□□ -2.05
CHRNA7-219ENST00000636709 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
CHRNA7-219ENST00000636709 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
CHRNA7-219ENST00000636709 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
CHRNA7-219ENST00000636709 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
CHRNA7-219ENST00000636709 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
CHRNA7-219ENST00000636709 KRTAP4-6Q9BYQ5 205 aa2.13□□□□□ -2.07
CHRNA7-219ENST00000636709 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
CHRNA7-219ENST00000636709 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
CHRNA7-219ENST00000636709 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
CHRNA7-219ENST00000636709 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
CHRNA7-219ENST00000636709 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
CHRNA7-219ENST00000636709 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
CHRNA7-219ENST00000636709 KMT2DO14686 5537 aa1.99□□□□□ -2.09
CHRNA7-219ENST00000636709 NEBP20929 6669 aa1.98□□□□□ -2.09
CHRNA7-219ENST00000636709 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
CHRNA7-219ENST00000636709 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
CHRNA7-219ENST00000636709 USH2AO75445 5202 aa1.93□□□□□ -2.1
CHRNA7-219ENST00000636709 FCGBPQ9Y6R7 5405 aaPredicted RBP1.87□□□□□ -2.11
CHRNA7-219ENST00000636709 KRTAP5-9P26371 169 aa1.86□□□□□ -2.11
CHRNA7-219ENST00000636709 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
CHRNA7-219ENST00000636709 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
CHRNA7-219ENST00000636709 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
CHRNA7-219ENST00000636709 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
CHRNA7-219ENST00000636709 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CHRNA7-219ENST00000636709 KRTAP5-3Q6L8H2 238 aa1.61□□□□□ -2.15
CHRNA7-219ENST00000636709 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
CHRNA7-219ENST00000636709 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
CHRNA7-219ENST00000636709 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CHRNA7-219ENST00000636709 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
CHRNA7-219ENST00000636709 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CHRNA7-219ENST00000636709 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
CHRNA7-219ENST00000636709 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
CHRNA7-219ENST00000636709 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
CHRNA7-219ENST00000636709 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
CHRNA7-219ENST00000636709 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
CHRNA7-219ENST00000636709 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
CHRNA7-219ENST00000636709 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
CHRNA7-219ENST00000636709 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
CHRNA7-219ENST00000636709 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
CHRNA7-219ENST00000636709 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.02□□□□□ -2.25
CHRNA7-219ENST00000636709 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CHRNA7-219ENST00000636709 KRTAP5-7Q6L8G8 165 aa0.95□□□□□ -2.26
CHRNA7-219ENST00000636709 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms