RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
CHRNA7-219ENST00000636709 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CHRNA7-219ENST00000636709 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
CHRNA7-219ENST00000636709 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
CHRNA7-219ENST00000636709 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
CHRNA7-219ENST00000636709 FAM9AQ8IZU1 332 aaPredicted RBP14.12□□□□□ -0.15
CHRNA7-219ENST00000636709 APLP2Q06481 763 aa14.11□□□□□ -0.15
CHRNA7-219ENST00000636709 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
CHRNA7-219ENST00000636709 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
CHRNA7-219ENST00000636709 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
CHRNA7-219ENST00000636709 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
CHRNA7-219ENST00000636709 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
CHRNA7-219ENST00000636709 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
CHRNA7-219ENST00000636709 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
CHRNA7-219ENST00000636709 NISCHQ9Y2I1 1504 aa13.57□□□□□ -0.24
CHRNA7-219ENST00000636709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.26
CHRNA7-219ENST00000636709 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.26
CHRNA7-219ENST00000636709 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.26
CHRNA7-219ENST00000636709 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
CHRNA7-219ENST00000636709 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
CHRNA7-219ENST00000636709 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-219ENST00000636709 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-219ENST00000636709 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
CHRNA7-219ENST00000636709 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
CHRNA7-219ENST00000636709 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
CHRNA7-219ENST00000636709 ITGAEP38570 1179 aa13.26□□□□□ -0.29
CHRNA7-219ENST00000636709 NEFLP07196 543 aa13.2□□□□□ -0.3
CHRNA7-219ENST00000636709 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
CHRNA7-219ENST00000636709 MYT1Q01538 1121 aa13.15□□□□□ -0.3
CHRNA7-219ENST00000636709 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
CHRNA7-219ENST00000636709 SLC24A1O60721 1099 aa13.02□□□□□ -0.32
CHRNA7-219ENST00000636709 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
CHRNA7-219ENST00000636709 BCANQ96GW7 911 aa12.96□□□□□ -0.34
CHRNA7-219ENST00000636709 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
CHRNA7-219ENST00000636709 FBLN2P98095 1184 aa12.92□□□□□ -0.34
CHRNA7-219ENST00000636709 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
CHRNA7-219ENST00000636709 CLSPNQ9HAW4 1339 aa12.87□□□□□ -0.35
CHRNA7-219ENST00000636709 FAM50AQ14320 339 aaKnown RBP12.78□□□□□ -0.36
CHRNA7-219ENST00000636709 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
CHRNA7-219ENST00000636709 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHRNA7-219ENST00000636709 ZNF326Q5BKZ1 582 aaKnown RBP12.76□□□□□ -0.37
CHRNA7-219ENST00000636709 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
CHRNA7-219ENST00000636709 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
CHRNA7-219ENST00000636709 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
CHRNA7-219ENST00000636709 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-219ENST00000636709 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
CHRNA7-219ENST00000636709 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
CHRNA7-219ENST00000636709 A0A0G2JS52 829 aa12.59□□□□□ -0.39
CHRNA7-219ENST00000636709 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
CHRNA7-219ENST00000636709 ABCC9O60706 1549 aa12.56□□□□□ -0.4
CHRNA7-219ENST00000636709 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
CHRNA7-219ENST00000636709 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
CHRNA7-219ENST00000636709 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
CHRNA7-219ENST00000636709 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
CHRNA7-219ENST00000636709 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
CHRNA7-219ENST00000636709 NEFMP07197 916 aa12.51□□□□□ -0.41
CHRNA7-219ENST00000636709 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
CHRNA7-219ENST00000636709 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
CHRNA7-219ENST00000636709 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
CHRNA7-219ENST00000636709 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
CHRNA7-219ENST00000636709 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
CHRNA7-219ENST00000636709 HRCP23327 699 aa12.39□□□□□ -0.43
CHRNA7-219ENST00000636709 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
CHRNA7-219ENST00000636709 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
CHRNA7-219ENST00000636709 ANP32CO43423 234 aa12.29□□□□□ -0.44
CHRNA7-219ENST00000636709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.44
CHRNA7-219ENST00000636709 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
CHRNA7-219ENST00000636709 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
CHRNA7-219ENST00000636709 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
CHRNA7-219ENST00000636709 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
CHRNA7-219ENST00000636709 ARXQ96QS3 562 aa12.21□□□□□ -0.46
CHRNA7-219ENST00000636709 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.46
CHRNA7-219ENST00000636709 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
CHRNA7-219ENST00000636709 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
CHRNA7-219ENST00000636709 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
CHRNA7-219ENST00000636709 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
CHRNA7-219ENST00000636709 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
CHRNA7-219ENST00000636709 NPHP1O15259 732 aa12.08□□□□□ -0.48
CHRNA7-219ENST00000636709 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
CHRNA7-219ENST00000636709 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
CHRNA7-219ENST00000636709 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
CHRNA7-219ENST00000636709 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
CHRNA7-219ENST00000636709 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
CHRNA7-219ENST00000636709 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
CHRNA7-219ENST00000636709 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
CHRNA7-219ENST00000636709 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
CHRNA7-219ENST00000636709 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
CHRNA7-219ENST00000636709 ANP32BQ92688 251 aaKnown RBP12□□□□□ -0.49
CHRNA7-219ENST00000636709 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
CHRNA7-219ENST00000636709 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.5
CHRNA7-219ENST00000636709 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.5
CHRNA7-219ENST00000636709 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.5
CHRNA7-219ENST00000636709 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHRNA7-219ENST00000636709 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
CHRNA7-219ENST00000636709 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
CHRNA7-219ENST00000636709 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
CHRNA7-219ENST00000636709 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
CHRNA7-219ENST00000636709 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
CHRNA7-219ENST00000636709 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
CHRNA7-219ENST00000636709 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms