RNA–Protein interactions for RNA: ENST00000636384.2

SCN2A-211, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,007 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-211ENST00000636384 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
SCN2A-211ENST00000636384 VPS13DQ5THJ4 4388 aa1.27□□□□□ -2.21
SCN2A-211ENST00000636384 DNAH17Q9UFH2 4485 aa1.27□□□□□ -2.21
SCN2A-211ENST00000636384 LRP1Q07954 4544 aaKnown RBP1.27□□□□□ -2.21
SCN2A-211ENST00000636384 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
SCN2A-211ENST00000636384 DNAH9Q9NYC9 4486 aa1.26□□□□□ -2.21
SCN2A-211ENST00000636384 HSPG2P98160 4391 aa1.25□□□□□ -2.21
SCN2A-211ENST00000636384 MYCBP2O75592 4640 aa1.25□□□□□ -2.21
SCN2A-211ENST00000636384 FAT2Q9NYQ8 4349 aa1.25□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP2-2Q9BYT5 123 aa1.23□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP19-1Q8IUB9 90 aa1.23□□□□□ -2.21
SCN2A-211ENST00000636384 KRTAP4-8A0A0G2JLE6 195 aa1.21□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP4-8Q9BYQ9 185 aa1.21□□□□□ -2.22
SCN2A-211ENST00000636384 LRP2P98164 4655 aa1.2□□□□□ -2.22
SCN2A-211ENST00000636384 KMT2DO14686 5537 aa1.2□□□□□ -2.22
SCN2A-211ENST00000636384 PKD1P98161 4303 aa1.19□□□□□ -2.22
SCN2A-211ENST00000636384 FAT3Q8TDW7 4589 aa1.19□□□□□ -2.22
SCN2A-211ENST00000636384 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP4-12Q9BQ66 201 aa1.18□□□□□ -2.22
SCN2A-211ENST00000636384 TNXBP22105 4242 aa1.18□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP9-6A0A140TA67 174 aa1.16□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP9-7A8MTY7 169 aa1.16□□□□□ -2.22
SCN2A-211ENST00000636384 LOC100996750A0A140TA64 210 aa1.16□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP4-6Q9BYQ5 205 aa1.16□□□□□ -2.22
SCN2A-211ENST00000636384 KRTAP4-7Q9BYR0 210 aa1.14□□□□□ -2.23
SCN2A-211ENST00000636384 GPR98Q8WXG9 6306 aa1.14□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP20-1Q3LI63 56 aa1.13□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP4-9Q9BYQ8 210 aa1.12□□□□□ -2.23
SCN2A-211ENST00000636384 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
SCN2A-211ENST00000636384 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
SCN2A-211ENST00000636384 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
SCN2A-211ENST00000636384 LPAP08519 4548 aa1.12□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP9-2Q9BYQ4 174 aa1.11□□□□□ -2.23
SCN2A-211ENST00000636384 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
SCN2A-211ENST00000636384 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP9-8Q9BYQ0 159 aa1.09□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP4-11Q9BYQ6 195 aa1.09□□□□□ -2.23
SCN2A-211ENST00000636384 KRTAP9-3Q9BYQ3 159 aa1.08□□□□□ -2.24
SCN2A-211ENST00000636384 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
SCN2A-211ENST00000636384 MUC12Q9UKN1 5478 aa1.06□□□□□ -2.24
SCN2A-211ENST00000636384 SYNE2Q8WXH0 6885 aaKnown RBP1.05□□□□□ -2.24
SCN2A-211ENST00000636384 KRTAP9-6A8MVA2 160 aa1.05□□□□□ -2.24
SCN2A-211ENST00000636384 KRTAP4-3Q9BYR4 195 aa1.04□□□□□ -2.24
SCN2A-211ENST00000636384 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
SCN2A-211ENST00000636384 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
SCN2A-211ENST00000636384 MUC17Q685J3 4493 aa1□□□□□ -2.25
SCN2A-211ENST00000636384 KRTAP6-3Q3LI67 103 aa0.96□□□□□ -2.26
SCN2A-211ENST00000636384 KRTAP5-2Q701N4 177 aa0.94□□□□□ -2.26
SCN2A-211ENST00000636384 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.93□□□□□ -2.26
SCN2A-211ENST00000636384 KRTAP19-2Q3LHN2 52 aa0.92□□□□□ -2.26
SCN2A-211ENST00000636384 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
SCN2A-211ENST00000636384 KRTAP4-4Q9BYR3 166 aa0.88□□□□□ -2.27
SCN2A-211ENST00000636384 NEBP20929 6669 aa0.86□□□□□ -2.27
SCN2A-211ENST00000636384 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
SCN2A-211ENST00000636384 KRTAP5-5Q701N2 237 aaPredicted RBP0.85□□□□□ -2.27
SCN2A-211ENST00000636384 KRTAP4-2Q9BYR5 136 aa0.81□□□□□ -2.28
SCN2A-211ENST00000636384 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SCN2A-211ENST00000636384 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.76□□□□□ -2.29
SCN2A-211ENST00000636384 KRTAP5-3Q6L8H2 238 aa0.75□□□□□ -2.29
SCN2A-211ENST00000636384 KRTAP5-4Q6L8H1 288 aa0.72□□□□□ -2.29
SCN2A-211ENST00000636384 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SCN2A-211ENST00000636384 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
SCN2A-211ENST00000636384 KRTAP5-9P26371 169 aa0.69□□□□□ -2.3
SCN2A-211ENST00000636384 KRTAP5-1Q6L8H4 278 aa0.62□□□□□ -2.31
SCN2A-211ENST00000636384 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
SCN2A-211ENST00000636384 KRTAP5-11Q6L8G4 156 aa0.59□□□□□ -2.31
SCN2A-211ENST00000636384 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
SCN2A-211ENST00000636384 KRTAP5-8O75690 187 aa0.56□□□□□ -2.32
SCN2A-211ENST00000636384 KRTAP5-7Q6L8G8 165 aa0.55□□□□□ -2.32
SCN2A-211ENST00000636384 KRTAP21-2Q3LI59 83 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 72.6 ms