RNA–Protein interactions for RNA: ENST00000636384.2

SCN2A-211, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,007 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-211ENST00000636384 PELP1Q8IZL8 1130 aaKnown RBP8.18□□□□□ -1.1
SCN2A-211ENST00000636384 MYT1Q01538 1121 aa7.95□□□□□ -1.14
SCN2A-211ENST00000636384 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
SCN2A-211ENST00000636384 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
SCN2A-211ENST00000636384 ERICH6Q7L0X2 663 aa7.71□□□□□ -1.17
SCN2A-211ENST00000636384 TTBK1Q5TCY1 1321 aaPredicted RBP7.67□□□□□ -1.18
SCN2A-211ENST00000636384 RANGAP1P46060 587 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-211ENST00000636384 DAXXQ9UER7 740 aaPredicted RBP7.25□□□□□ -1.25
SCN2A-211ENST00000636384 CENPBP07199 599 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-211ENST00000636384 GLIPR1L2Q4G1C9 344 aa7.16□□□□□ -1.26
SCN2A-211ENST00000636384 NEFLP07196 543 aa7.14□□□□□ -1.27
SCN2A-211ENST00000636384 CLSPNQ9HAW4 1339 aa7.12□□□□□ -1.27
SCN2A-211ENST00000636384 RTL5Q5HYW3 569 aaPredicted RBP7.04□□□□□ -1.28
SCN2A-211ENST00000636384 MYT1LQ9UL68 1186 aa7□□□□□ -1.29
SCN2A-211ENST00000636384 ZNF316A6NFI3 1004 aaPredicted RBP6.98□□□□□ -1.29
SCN2A-211ENST00000636384 POLR3GLQ9BT43 218 aa6.94□□□□□ -1.3
SCN2A-211ENST00000636384 FAM9AQ8IZU1 332 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-211ENST00000636384 APLP2Q06481 763 aa6.87□□□□□ -1.31
SCN2A-211ENST00000636384 TNNT2P45379 298 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-211ENST00000636384 DCAF8L2P0C7V8 631 aa6.82□□□□□ -1.32
SCN2A-211ENST00000636384 ZEB1P37275 1124 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-211ENST00000636384 ANP32BQ92688 251 aaKnown RBP6.81□□□□□ -1.32
SCN2A-211ENST00000636384 EIF5BO60841 1220 aaKnown RBP6.79□□□□□ -1.32
SCN2A-211ENST00000636384 CDK11BP21127 795 aaKnown RBP6.73□□□□□ -1.33
SCN2A-211ENST00000636384 ZNF326Q5BKZ1 582 aaKnown RBP6.7□□□□□ -1.34
SCN2A-211ENST00000636384 CALRP27797 417 aaKnown RBP6.69□□□□□ -1.34
SCN2A-211ENST00000636384 CDK11AQ9UQ88 783 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-211ENST00000636384 TRIM44Q96DX7 344 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-211ENST00000636384 NCLP19338 710 aaKnown RBP6.68□□□□□ -1.34
SCN2A-211ENST00000636384 ZBTB47Q9UFB7 747 aaPredicted RBP6.64□□□□□ -1.35
SCN2A-211ENST00000636384 ATP1B4Q9UN42 357 aaPredicted RBP6.63□□□□□ -1.35
SCN2A-211ENST00000636384 EHMT2Q96KQ7 1210 aa6.61□□□□□ -1.35
SCN2A-211ENST00000636384 NEFMP07197 916 aa6.58□□□□□ -1.36
SCN2A-211ENST00000636384 TRIM26Q12899 539 aaPredicted RBP6.57□□□□□ -1.36
SCN2A-211ENST00000636384 PTMSP20962 102 aa6.55□□□□□ -1.36
SCN2A-211ENST00000636384 PCGF6Q9BYE7 350 aa6.52□□□□□ -1.37
SCN2A-211ENST00000636384 ANP32AP39687 249 aaKnown RBP6.51□□□□□ -1.37
SCN2A-211ENST00000636384 HSP90AA1P07900 732 aaKnown RBP6.47□□□□□ -1.37
SCN2A-211ENST00000636384 SLC24A1O60721 1099 aa6.47□□□□□ -1.37
SCN2A-211ENST00000636384 GOLGA6L22H0YM25 854 aa6.45□□□□□ -1.38
SCN2A-211ENST00000636384 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
SCN2A-211ENST00000636384 ANP32EQ9BTT0 268 aa6.42□□□□□ -1.38
SCN2A-211ENST00000636384 UPF2Q9HAU5 1272 aaKnown RBP6.41□□□□□ -1.38
SCN2A-211ENST00000636384 TNNT3P45378 269 aaPredicted RBP6.41□□□□□ -1.38
SCN2A-211ENST00000636384 L1TD1Q5T7N2 865 aaKnown RBP6.39□□□□□ -1.39
SCN2A-211ENST00000636384 PNNQ9H307 717 aaKnown RBP6.37□□□□□ -1.39
SCN2A-211ENST00000636384 NEUROD1Q13562 356 aa6.37□□□□□ -1.39
SCN2A-211ENST00000636384 SETQ01105 290 aaPredicted RBP6.36□□□□□ -1.39
SCN2A-211ENST00000636384 SLC4A1APQ9BWU0 796 aaKnown RBP6.36□□□□□ -1.39
SCN2A-211ENST00000636384 AMER1Q5JTC6 1135 aaPredicted RBP6.36□□□□□ -1.39
SCN2A-211ENST00000636384 USP35Q9P2H5 1018 aa6.36□□□□□ -1.39
SCN2A-211ENST00000636384 CNGB1Q14028 1251 aaPredicted RBP6.35□□□□□ -1.39
SCN2A-211ENST00000636384 DNTTIP2Q5QJE6 756 aaKnown RBP6.35□□□□□ -1.39
SCN2A-211ENST00000636384 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
SCN2A-211ENST00000636384 ERICH6BQ5W0A0 696 aa6.34□□□□□ -1.39
SCN2A-211ENST00000636384 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
SCN2A-211ENST00000636384 APPP05067 770 aa6.34□□□□□ -1.39
SCN2A-211ENST00000636384 GOLGA6L6A8MZA4 724 aa6.33□□□□□ -1.4
SCN2A-211ENST00000636384 MEX3CQ5U5Q3 659 aaKnown RBP6.33□□□□□ -1.4
SCN2A-211ENST00000636384 LAS1LQ9Y4W2 734 aaKnown RBP6.33□□□□□ -1.4
SCN2A-211ENST00000636384 ZRSR1Q15695 479 aaKnown RBP6.32□□□□□ -1.4
SCN2A-211ENST00000636384 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-211ENST00000636384 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
SCN2A-211ENST00000636384 NRDCO43847 1150 aa6.32□□□□□ -1.4
SCN2A-211ENST00000636384 NEFHP12036 1026 aa6.31□□□□□ -1.4
SCN2A-211ENST00000636384 GOLGA6L4A6NEF3 574 aa6.3□□□□□ -1.4
SCN2A-211ENST00000636384 A0A0U1RQG5 324 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-211ENST00000636384 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
SCN2A-211ENST00000636384 NAP1L5Q96NT1 182 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-211ENST00000636384 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.25□□□□□ -1.41
SCN2A-211ENST00000636384 HMGB1P09429 215 aaKnown RBP6.24□□□□□ -1.41
SCN2A-211ENST00000636384 NOC3LQ8WTT2 800 aaKnown RBP6.24□□□□□ -1.41
SCN2A-211ENST00000636384 LMOD2Q6P5Q4 547 aa6.24□□□□□ -1.41
SCN2A-211ENST00000636384 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
SCN2A-211ENST00000636384 NPM2Q86SE8 214 aaKnown RBP6.22□□□□□ -1.41
SCN2A-211ENST00000636384 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
SCN2A-211ENST00000636384 RRP12Q5JTH9 1297 aaKnown RBP6.22□□□□□ -1.41
SCN2A-211ENST00000636384 BECN1Q14457 450 aa6.2□□□□□ -1.42
SCN2A-211ENST00000636384 ARXQ96QS3 562 aa6.2□□□□□ -1.42
SCN2A-211ENST00000636384 BCL11AQ9H165 835 aa6.2□□□□□ -1.42
SCN2A-211ENST00000636384 ARID4BQ4LE39 1312 aaPredicted RBP6.2□□□□□ -1.42
SCN2A-211ENST00000636384 WDR43Q15061 677 aaKnown RBP eCLIP6.2□□□□□ -1.42
SCN2A-211ENST00000636384 NBR1Q14596 966 aa6.19□□□□□ -1.42
SCN2A-211ENST00000636384 DDRGK1Q96HY6 314 aa6.18□□□□□ -1.42
SCN2A-211ENST00000636384 SEPT11Q9NVA2 429 aaKnown RBP6.17□□□□□ -1.42
SCN2A-211ENST00000636384 MSNP26038 577 aaKnown RBP6.16□□□□□ -1.42
SCN2A-211ENST00000636384 NCBP3Q53F19 620 aaKnown RBP6.16□□□□□ -1.42
SCN2A-211ENST00000636384 DIEXFQ68CQ4 756 aaKnown RBP6.16□□□□□ -1.42
SCN2A-211ENST00000636384 ANP32CO43423 234 aa6.16□□□□□ -1.42
SCN2A-211ENST00000636384 PPM1GO15355 546 aaPredicted RBP6.16□□□□□ -1.42
SCN2A-211ENST00000636384 HMMRO75330 724 aa6.15□□□□□ -1.43
SCN2A-211ENST00000636384 HTATSF1O43719 755 aaKnown RBP6.14□□□□□ -1.43
SCN2A-211ENST00000636384 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
SCN2A-211ENST00000636384 NOM1Q5C9Z4 860 aaKnown RBP6.12□□□□□ -1.43
SCN2A-211ENST00000636384 BCANQ96GW7 911 aa6.12□□□□□ -1.43
SCN2A-211ENST00000636384 HRCP23327 699 aa6.12□□□□□ -1.43
SCN2A-211ENST00000636384 GOLGA6L3A6NEY3 463 aa6.12□□□□□ -1.43
SCN2A-211ENST00000636384 KRI1Q8N9T8 703 aaKnown RBP6.12□□□□□ -1.43
SCN2A-211ENST00000636384 GTF3C3Q9Y5Q9 886 aa6.11□□□□□ -1.43
SCN2A-211ENST00000636384 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms