RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
FARP1-242ENST00000627049 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
FARP1-242ENST00000627049 LCE3EQ5T5B0 92 aa5.61□□□□□ -1.51
FARP1-242ENST00000627049 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
FARP1-242ENST00000627049 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.52
FARP1-242ENST00000627049 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
FARP1-242ENST00000627049 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
FARP1-242ENST00000627049 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
FARP1-242ENST00000627049 MT1MQ8N339 61 aa5.48□□□□□ -1.53
FARP1-242ENST00000627049 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
FARP1-242ENST00000627049 PRM1P04553 51 aa5.34□□□□□ -1.55
FARP1-242ENST00000627049 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
FARP1-242ENST00000627049 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
FARP1-242ENST00000627049 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
FARP1-242ENST00000627049 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
FARP1-242ENST00000627049 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
FARP1-242ENST00000627049 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
FARP1-242ENST00000627049 MT3P25713 68 aa5.12□□□□□ -1.59
FARP1-242ENST00000627049 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
FARP1-242ENST00000627049 MT1AP04731 61 aa5.08□□□□□ -1.6
FARP1-242ENST00000627049 MT4P47944 62 aa5.06□□□□□ -1.6
FARP1-242ENST00000627049 KMT2DO14686 5537 aa4.97□□□□□ -1.61
FARP1-242ENST00000627049 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
FARP1-242ENST00000627049 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
FARP1-242ENST00000627049 USH2AO75445 5202 aa4.91□□□□□ -1.62
FARP1-242ENST00000627049 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
FARP1-242ENST00000627049 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
FARP1-242ENST00000627049 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
FARP1-242ENST00000627049 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
FARP1-242ENST00000627049 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
FARP1-242ENST00000627049 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
FARP1-242ENST00000627049 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
FARP1-242ENST00000627049 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
FARP1-242ENST00000627049 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
FARP1-242ENST00000627049 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
FARP1-242ENST00000627049 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
FARP1-242ENST00000627049 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
FARP1-242ENST00000627049 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
FARP1-242ENST00000627049 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
FARP1-242ENST00000627049 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
FARP1-242ENST00000627049 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
FARP1-242ENST00000627049 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
FARP1-242ENST00000627049 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
FARP1-242ENST00000627049 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
FARP1-242ENST00000627049 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
FARP1-242ENST00000627049 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
FARP1-242ENST00000627049 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
FARP1-242ENST00000627049 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
FARP1-242ENST00000627049 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
FARP1-242ENST00000627049 NEBP20929 6669 aa3.95□□□□□ -1.78
FARP1-242ENST00000627049 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
FARP1-242ENST00000627049 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
FARP1-242ENST00000627049 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
FARP1-242ENST00000627049 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
FARP1-242ENST00000627049 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
FARP1-242ENST00000627049 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
FARP1-242ENST00000627049 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
FARP1-242ENST00000627049 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
FARP1-242ENST00000627049 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
FARP1-242ENST00000627049 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
FARP1-242ENST00000627049 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
FARP1-242ENST00000627049 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
FARP1-242ENST00000627049 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
FARP1-242ENST00000627049 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
FARP1-242ENST00000627049 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
FARP1-242ENST00000627049 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
FARP1-242ENST00000627049 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
FARP1-242ENST00000627049 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
FARP1-242ENST00000627049 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
FARP1-242ENST00000627049 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
FARP1-242ENST00000627049 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
FARP1-242ENST00000627049 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
FARP1-242ENST00000627049 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
FARP1-242ENST00000627049 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
FARP1-242ENST00000627049 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
FARP1-242ENST00000627049 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
FARP1-242ENST00000627049 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms