RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
ITSN2-213ENST00000622089 LYSTQ99698 3801 aa2.63□□□□□ -1.99
ITSN2-213ENST00000622089 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
ITSN2-213ENST00000622089 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
ITSN2-213ENST00000622089 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
ITSN2-213ENST00000622089 TNXBP22105 4242 aa2.6□□□□□ -1.99
ITSN2-213ENST00000622089 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
ITSN2-213ENST00000622089 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
ITSN2-213ENST00000622089 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
ITSN2-213ENST00000622089 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
ITSN2-213ENST00000622089 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
ITSN2-213ENST00000622089 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
ITSN2-213ENST00000622089 HYDINQ4G0P3 5121 aa2.52□□□□□ -2.01
ITSN2-213ENST00000622089 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
ITSN2-213ENST00000622089 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
ITSN2-213ENST00000622089 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
ITSN2-213ENST00000622089 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
ITSN2-213ENST00000622089 LPAP08519 4548 aa2.5□□□□□ -2.01
ITSN2-213ENST00000622089 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
ITSN2-213ENST00000622089 LCE2AQ5TA79 106 aaPredicted RBP2.47□□□□□ -2.01
ITSN2-213ENST00000622089 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
ITSN2-213ENST00000622089 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
ITSN2-213ENST00000622089 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
ITSN2-213ENST00000622089 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
ITSN2-213ENST00000622089 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
ITSN2-213ENST00000622089 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
ITSN2-213ENST00000622089 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
ITSN2-213ENST00000622089 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
ITSN2-213ENST00000622089 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
ITSN2-213ENST00000622089 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
ITSN2-213ENST00000622089 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
ITSN2-213ENST00000622089 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
ITSN2-213ENST00000622089 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
ITSN2-213ENST00000622089 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
ITSN2-213ENST00000622089 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
ITSN2-213ENST00000622089 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
ITSN2-213ENST00000622089 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
ITSN2-213ENST00000622089 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
ITSN2-213ENST00000622089 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
ITSN2-213ENST00000622089 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
ITSN2-213ENST00000622089 MUC2Q02817 5179 aa2.03□□□□□ -2.08
ITSN2-213ENST00000622089 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
ITSN2-213ENST00000622089 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
ITSN2-213ENST00000622089 NEBP20929 6669 aa1.98□□□□□ -2.09
ITSN2-213ENST00000622089 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
ITSN2-213ENST00000622089 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
ITSN2-213ENST00000622089 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
ITSN2-213ENST00000622089 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
ITSN2-213ENST00000622089 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
ITSN2-213ENST00000622089 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
ITSN2-213ENST00000622089 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
ITSN2-213ENST00000622089 KMT2DO14686 5537 aa1.77□□□□□ -2.13
ITSN2-213ENST00000622089 USH2AO75445 5202 aa1.77□□□□□ -2.13
ITSN2-213ENST00000622089 KRTAP4-12Q9BQ66 201 aa1.77□□□□□ -2.13
ITSN2-213ENST00000622089 KRTAP4-2Q9BYR5 136 aa1.77□□□□□ -2.13
ITSN2-213ENST00000622089 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
ITSN2-213ENST00000622089 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
ITSN2-213ENST00000622089 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
ITSN2-213ENST00000622089 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
ITSN2-213ENST00000622089 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
ITSN2-213ENST00000622089 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
ITSN2-213ENST00000622089 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
ITSN2-213ENST00000622089 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
ITSN2-213ENST00000622089 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
ITSN2-213ENST00000622089 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
ITSN2-213ENST00000622089 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
ITSN2-213ENST00000622089 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
ITSN2-213ENST00000622089 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
ITSN2-213ENST00000622089 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
ITSN2-213ENST00000622089 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
ITSN2-213ENST00000622089 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
ITSN2-213ENST00000622089 KRTAP5-1Q6L8H4 278 aa1.27□□□□□ -2.21
ITSN2-213ENST00000622089 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
ITSN2-213ENST00000622089 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
ITSN2-213ENST00000622089 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
ITSN2-213ENST00000622089 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
ITSN2-213ENST00000622089 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 120 ms