RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
CLTC-215ENST00000621829 MT1AP04731 61 aa3.14□□□□□ -1.91
CLTC-215ENST00000621829 RYR3Q15413 4870 aa3.13□□□□□ -1.91
CLTC-215ENST00000621829 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
CLTC-215ENST00000621829 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
CLTC-215ENST00000621829 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CLTC-215ENST00000621829 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
CLTC-215ENST00000621829 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
CLTC-215ENST00000621829 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
CLTC-215ENST00000621829 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
CLTC-215ENST00000621829 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
CLTC-215ENST00000621829 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CLTC-215ENST00000621829 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CLTC-215ENST00000621829 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
CLTC-215ENST00000621829 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
CLTC-215ENST00000621829 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
CLTC-215ENST00000621829 HERC2O95714 4834 aa2.96□□□□□ -1.94
CLTC-215ENST00000621829 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
CLTC-215ENST00000621829 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
CLTC-215ENST00000621829 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
CLTC-215ENST00000621829 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
CLTC-215ENST00000621829 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
CLTC-215ENST00000621829 RYR2Q92736 4967 aa2.77□□□□□ -1.97
CLTC-215ENST00000621829 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
CLTC-215ENST00000621829 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
CLTC-215ENST00000621829 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CLTC-215ENST00000621829 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
CLTC-215ENST00000621829 HERC1Q15751 4861 aa2.6□□□□□ -1.99
CLTC-215ENST00000621829 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
CLTC-215ENST00000621829 PCLOQ9Y6V0 5065 aa2.6□□□□□ -1.99
CLTC-215ENST00000621829 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
CLTC-215ENST00000621829 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
CLTC-215ENST00000621829 LCE2AQ5TA79 106 aaPredicted RBP2.51□□□□□ -2.01
CLTC-215ENST00000621829 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
CLTC-215ENST00000621829 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CLTC-215ENST00000621829 KMT2DO14686 5537 aa2.5□□□□□ -2.01
CLTC-215ENST00000621829 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
CLTC-215ENST00000621829 MUC2Q02817 5179 aa2.47□□□□□ -2.01
CLTC-215ENST00000621829 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
CLTC-215ENST00000621829 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
CLTC-215ENST00000621829 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
CLTC-215ENST00000621829 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CLTC-215ENST00000621829 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
CLTC-215ENST00000621829 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
CLTC-215ENST00000621829 EPPK1P58107 5090 aaKnown RBP2.32□□□□□ -2.04
CLTC-215ENST00000621829 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
CLTC-215ENST00000621829 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
CLTC-215ENST00000621829 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.28□□□□□ -2.04
CLTC-215ENST00000621829 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
CLTC-215ENST00000621829 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CLTC-215ENST00000621829 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
CLTC-215ENST00000621829 ABCA13Q86UQ4 5058 aa2.11□□□□□ -2.07
CLTC-215ENST00000621829 USH2AO75445 5202 aa2.08□□□□□ -2.08
CLTC-215ENST00000621829 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
CLTC-215ENST00000621829 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
CLTC-215ENST00000621829 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
CLTC-215ENST00000621829 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.11
CLTC-215ENST00000621829 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
CLTC-215ENST00000621829 NEBP20929 6669 aa1.82□□□□□ -2.12
CLTC-215ENST00000621829 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CLTC-215ENST00000621829 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
CLTC-215ENST00000621829 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
CLTC-215ENST00000621829 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
CLTC-215ENST00000621829 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
CLTC-215ENST00000621829 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
CLTC-215ENST00000621829 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CLTC-215ENST00000621829 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
CLTC-215ENST00000621829 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
CLTC-215ENST00000621829 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CLTC-215ENST00000621829 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
CLTC-215ENST00000621829 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
CLTC-215ENST00000621829 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
CLTC-215ENST00000621829 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
CLTC-215ENST00000621829 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
CLTC-215ENST00000621829 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
CLTC-215ENST00000621829 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
CLTC-215ENST00000621829 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms