RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
CSMD2-210ENST00000619121 KRTAP4-8Q9BYQ9 185 aa2.13□□□□□ -2.07
CSMD2-210ENST00000619121 HERC1Q15751 4861 aa2.11□□□□□ -2.07
CSMD2-210ENST00000619121 EPPK1P58107 5090 aaKnown RBP2.11□□□□□ -2.07
CSMD2-210ENST00000619121 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.08
CSMD2-210ENST00000619121 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
CSMD2-210ENST00000619121 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
CSMD2-210ENST00000619121 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
CSMD2-210ENST00000619121 MT4P47944 62 aa2.06□□□□□ -2.08
CSMD2-210ENST00000619121 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
CSMD2-210ENST00000619121 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
CSMD2-210ENST00000619121 LCE1DQ5T752 114 aa2.04□□□□□ -2.08
CSMD2-210ENST00000619121 PRM1P04553 51 aa2.03□□□□□ -2.08
CSMD2-210ENST00000619121 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
CSMD2-210ENST00000619121 KIAA1109Q2LD37 5005 aa2.01□□□□□ -2.09
CSMD2-210ENST00000619121 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CSMD2-210ENST00000619121 LOC100996750A0A140TA64 210 aa2□□□□□ -2.09
CSMD2-210ENST00000619121 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
CSMD2-210ENST00000619121 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
CSMD2-210ENST00000619121 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
CSMD2-210ENST00000619121 LCE5AQ5TCM9 118 aa1.98□□□□□ -2.09
CSMD2-210ENST00000619121 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
CSMD2-210ENST00000619121 KRTAP4-3Q9BYR4 195 aa1.96□□□□□ -2.1
CSMD2-210ENST00000619121 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
CSMD2-210ENST00000619121 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
CSMD2-210ENST00000619121 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
CSMD2-210ENST00000619121 HMCN2Q8NDA2 5059 aa1.91□□□□□ -2.1
CSMD2-210ENST00000619121 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
CSMD2-210ENST00000619121 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
CSMD2-210ENST00000619121 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.88□□□□□ -2.11
CSMD2-210ENST00000619121 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
CSMD2-210ENST00000619121 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.12
CSMD2-210ENST00000619121 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
CSMD2-210ENST00000619121 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
CSMD2-210ENST00000619121 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
CSMD2-210ENST00000619121 KRTAP5-9P26371 169 aa1.81□□□□□ -2.12
CSMD2-210ENST00000619121 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
CSMD2-210ENST00000619121 NEBP20929 6669 aa1.75□□□□□ -2.13
CSMD2-210ENST00000619121 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
CSMD2-210ENST00000619121 MUC2Q02817 5179 aa1.74□□□□□ -2.13
CSMD2-210ENST00000619121 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
CSMD2-210ENST00000619121 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
CSMD2-210ENST00000619121 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
CSMD2-210ENST00000619121 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
CSMD2-210ENST00000619121 USH2AO75445 5202 aa1.67□□□□□ -2.14
CSMD2-210ENST00000619121 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
CSMD2-210ENST00000619121 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
CSMD2-210ENST00000619121 KMT2DO14686 5537 aa1.6□□□□□ -2.15
CSMD2-210ENST00000619121 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
CSMD2-210ENST00000619121 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
CSMD2-210ENST00000619121 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CSMD2-210ENST00000619121 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
CSMD2-210ENST00000619121 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
CSMD2-210ENST00000619121 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
CSMD2-210ENST00000619121 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
CSMD2-210ENST00000619121 KRTAP5-3Q6L8H2 238 aa1.42□□□□□ -2.18
CSMD2-210ENST00000619121 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
CSMD2-210ENST00000619121 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CSMD2-210ENST00000619121 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
CSMD2-210ENST00000619121 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
CSMD2-210ENST00000619121 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
CSMD2-210ENST00000619121 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CSMD2-210ENST00000619121 KRTAP4-6Q9BYQ5 205 aa1.37□□□□□ -2.19
CSMD2-210ENST00000619121 KRTAP4-12Q9BQ66 201 aa1.33□□□□□ -2.2
CSMD2-210ENST00000619121 KRTAP4-2Q9BYR5 136 aa1.33□□□□□ -2.2
CSMD2-210ENST00000619121 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
CSMD2-210ENST00000619121 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
CSMD2-210ENST00000619121 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
CSMD2-210ENST00000619121 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
CSMD2-210ENST00000619121 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CSMD2-210ENST00000619121 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.13□□□□□ -2.23
CSMD2-210ENST00000619121 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CSMD2-210ENST00000619121 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
CSMD2-210ENST00000619121 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
CSMD2-210ENST00000619121 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
CSMD2-210ENST00000619121 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
CSMD2-210ENST00000619121 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms