RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
PCSK6-217ENST00000618548 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
PCSK6-217ENST00000618548 KMT2DO14686 5537 aa6.62□□□□□ -1.35
PCSK6-217ENST00000618548 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
PCSK6-217ENST00000618548 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
PCSK6-217ENST00000618548 USH2AO75445 5202 aa6.49□□□□□ -1.37
PCSK6-217ENST00000618548 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
PCSK6-217ENST00000618548 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
PCSK6-217ENST00000618548 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
PCSK6-217ENST00000618548 LCE3DQ9BYE3 92 aa6.42□□□□□ -1.38
PCSK6-217ENST00000618548 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
PCSK6-217ENST00000618548 MT1MQ8N339 61 aa6.35□□□□□ -1.39
PCSK6-217ENST00000618548 LCE3EQ5T5B0 92 aa6.34□□□□□ -1.39
PCSK6-217ENST00000618548 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
PCSK6-217ENST00000618548 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
PCSK6-217ENST00000618548 PRM1P04553 51 aa6.16□□□□□ -1.42
PCSK6-217ENST00000618548 SPRR2EP22531 72 aa6.09□□□□□ -1.43
PCSK6-217ENST00000618548 SPRR2BP35325 72 aa6.09□□□□□ -1.43
PCSK6-217ENST00000618548 SPRR2AP35326 72 aa6.09□□□□□ -1.43
PCSK6-217ENST00000618548 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
PCSK6-217ENST00000618548 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
PCSK6-217ENST00000618548 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
PCSK6-217ENST00000618548 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
PCSK6-217ENST00000618548 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
PCSK6-217ENST00000618548 SPRR2DP22532 72 aa5.86□□□□□ -1.47
PCSK6-217ENST00000618548 MT1AP04731 61 aa5.8□□□□□ -1.48
PCSK6-217ENST00000618548 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
PCSK6-217ENST00000618548 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
PCSK6-217ENST00000618548 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
PCSK6-217ENST00000618548 MT3P25713 68 aa5.65□□□□□ -1.5
PCSK6-217ENST00000618548 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
PCSK6-217ENST00000618548 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
PCSK6-217ENST00000618548 MUC19Q7Z5P9 8384 aa5.54□□□□□ -1.52
PCSK6-217ENST00000618548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
PCSK6-217ENST00000618548 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
PCSK6-217ENST00000618548 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
PCSK6-217ENST00000618548 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
PCSK6-217ENST00000618548 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
PCSK6-217ENST00000618548 MT4P47944 62 aa5.26□□□□□ -1.57
PCSK6-217ENST00000618548 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
PCSK6-217ENST00000618548 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
PCSK6-217ENST00000618548 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
PCSK6-217ENST00000618548 LCE1DQ5T752 114 aa5.15□□□□□ -1.58
PCSK6-217ENST00000618548 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
PCSK6-217ENST00000618548 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
PCSK6-217ENST00000618548 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
PCSK6-217ENST00000618548 NEBP20929 6669 aa4.79□□□□□ -1.64
PCSK6-217ENST00000618548 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
PCSK6-217ENST00000618548 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
PCSK6-217ENST00000618548 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
PCSK6-217ENST00000618548 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
PCSK6-217ENST00000618548 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
PCSK6-217ENST00000618548 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
PCSK6-217ENST00000618548 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
PCSK6-217ENST00000618548 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PCSK6-217ENST00000618548 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
PCSK6-217ENST00000618548 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
PCSK6-217ENST00000618548 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
PCSK6-217ENST00000618548 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PCSK6-217ENST00000618548 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
PCSK6-217ENST00000618548 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
PCSK6-217ENST00000618548 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
PCSK6-217ENST00000618548 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
PCSK6-217ENST00000618548 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
PCSK6-217ENST00000618548 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
PCSK6-217ENST00000618548 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
PCSK6-217ENST00000618548 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
PCSK6-217ENST00000618548 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
PCSK6-217ENST00000618548 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
PCSK6-217ENST00000618548 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PCSK6-217ENST00000618548 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
PCSK6-217ENST00000618548 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
PCSK6-217ENST00000618548 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PCSK6-217ENST00000618548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
PCSK6-217ENST00000618548 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
PCSK6-217ENST00000618548 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PCSK6-217ENST00000618548 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms